Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07065 ATGTTACATGATCTTATACTTCAGTTCAATTCAACAATGACATATTCAGGATCAATTCGATTGTCTCATGACTTTACACAATACATTAGTAATAATGGAAGCTGTAGTTTTTGTCATAAACCTAATTTCGGTAATCGATTATGTTTTGTCGCCTTCAATCATCTGCGCCATGGTTTGAGGGTGGATTCTTCAGCACTCGTATTTTCCAGAATACATGTTCAACTTAAGCCTGTACCTTCTAGATGTAATGTTTTGTTGTGTCGGTCTGCCCTGGTACCGGCTGGAGGGTGTGAGGCTCCGCTGTTGAAAGTGGCCACTGTTTCGTTGTCAAGGTCATGTAATGCTATATCAGGAAGACCGTTTATGCTTCAATTAATCCCCGCTCTTGGTATAATTGGCTTTGCTATCTTTGGTCTTGAACCTCTCCTACGCCGTTGCAGGGCTCTCTTTCTCCAAGACTGGAACGATAAAAGTTGGAAGAAAAGTATTTCACGTTATATAATGACATCTTATTTTCAACCTTTGCTGCTGTGGACTGGGGTAATGCTGCTCTGCAGGGGCTTAGATCCACTAGTTGTACAATCAAAAACCAGTCCGATTTTAAAGCAACGGCTGCTGAATTTTGTCAGATCTTTTTCAACCGTGCTTGCATTTGCCTACTGTTCTTCAAGCTTTGTTCGACAAGCACAAAATTTCTGTATGGAGACAAATGCCGACAACAATGAAAGAAAAATGAGCATTGATCTTATTGGGAAAGCTGTATATACTGCAGTATGGGTTGCTGCCGTAACATTGTTCATGGAGTTGTTGGGTCTCTCTGCACAGAAGTGGTTGGCTGCTGGTGGTATGGGTACAGTATTGCTTTCACTTGCAGGCCGTGAGATATTCACGAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGGATACGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAGTAGTTAGAGGTGCTGATTGTGAAGCAGTTCACATTCCTAATCACAAGTTGAGCGTAAATGTTGTGAGGAATCTTAGTAAGAAAACTCATTGGCGCATCAAAACTCACCTTGCTATCAGTCACTTGGATGTCAACAAGATTGATACCATCATAGCTGATATGCGCAAGGTTTTGGCAAAAAATCCTCTAGTAGAACAAAAAAAATTGCACAGAAGGGTTTTTCTGGAGGATGTCAATCCAGAAAATCAAGCTCTTATGATATTAGTATCTTGCTTTGTCAAAACTTCACATTCTGAAGAGTACCTCCGTGTTAAGGAGGCCATTCTCTTGGATCTTCTTAGAGTCATCAGTCATCATGGAGCTCGGCTAGCCACACCCATCCGCACAATTCAGAAGATGTACAGTGATTCTGATTTAGAAATTGATCCATTTGACGACGCCATTTTCACTCGTTCGAGAGCAAAGGGAAACCACTCTTTCCCATTCACAAATTCACCTTATAAAGCTAAGTCTTCAACTCAATCAACTACTGTAAATGATGAGAAAGATGCCAAGATTCGTGAAACCTTGATAACTGGTTTCAAAGACGAAGGTGAAAAAATTGCCGCAACATGGACCCCCTCATCCAGTGTAAAGTCCCAGGATAAGTTAAAGTCAACATCTAAAGCTAAGACCCGGAATGTGGCTTCTGAATCTTCTGACAATCCAGTTCAGAAGGCCTCTAAATCAGAAACATCACCCCAAATTTTGTTATCATCCAACGAGTCTTCACCATCAAAGCAAGATGAAGAAAAATGA 1815 0.4105 MLHDLILQFNSTMTYSGSIRLSHDFTQYISNNGSCSFCHKPNFGNRLCFVAFNHLRHGLRVDSSALVFSRIHVQLKPVPSRCNVLLCRSALVPAGGCEAPLLKVATVSLSRSCNAISGRPFMLQLIPALGIIGFAIFGLEPLLRRCRALFLQDWNDKSWKKSISRYIMTSYFQPLLLWTGVMLLCRGLDPLVVQSKTSPILKQRLLNFVRSFSTVLAFAYCSSSFVRQAQNFCMETNADNNERKMSIDLIGKAVYTAVWVAAVTLFMELLGLSAQKWLAAGGMGTVLLSLAGREIFTNFLSSVMIHATRPFVVNERIKTKIKGYEVSGRVEHVGWWSPTVVRGADCEAVHIPNHKLSVNVVRNLSKKTHWRIKTHLAISHLDVNKIDTIIADMRKVLAKNPLVEQKKLHRRVFLEDVNPENQALMILVSCFVKTSHSEEYLRVKEAILLDLLRVISHHGARLATPIRTIQKMYSDSDLEIDPFDDAIFTRSRAKGNHSFPFTNSPYKAKSSTQSTTVNDEKDAKIRETLITGFKDEGEKIAATWTPSSSVKSQDKLKSTSKAKTRNVASESSDNPVQKASKSETSPQILLSSNESSPSKQDEEK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07065 604 Gene3D - 310 363 IPR023408 -
Mepo3g07065 604 Gene3D - 175 309 - -
Mepo3g07065 604 SUPERFAMILY Sm-like ribonucleoproteins 295 365 IPR010920 -
Mepo3g07065 604 MobiDBLite consensus disorder prediction 499 523 - -
Mepo3g07065 604 MobiDBLite consensus disorder prediction 499 518 - -
Mepo3g07065 604 Pfam Mechanosensitive ion channel 252 461 IPR006685 GO:0016020|GO:0055085
Mepo3g07065 604 MobiDBLite consensus disorder prediction 544 604 - -
Mepo3g07065 604 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 13 597 IPR045042 -
Mepo3g07065 604 MobiDBLite consensus disorder prediction 562 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07065 Mepo-Chr3 84309727 84315765 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07065 77 583 Mechanosensitive Ion Channel Family AT1G58200 55.877 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07065 K22047 - mtr:11434686 1158.28