Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07061 ATGAACTTGTGCTTCAAGTCTTCAATTTCAACAATGGCGTACCCAGGTTCTATGCAATTTTCTCGTGACGTTAGGCTCAAAAGTAGTAATAATGGACCCCGTAGTTTTCAGCATCATAATCCGGCGCGGGTTGGAAGATTACATTTAGTCACCACAAATCTTTTACCGCGCACTTTGAAGCAAGATTCTTTGTCACATCATCTTTTGCGCGGAGTACACGCCCCAATAAGGCACGCGTCTTCCAGGTGCAGTATTTTTGTATGTCGGTCTGCCATCCTACCGGGCGGTGGAGGGAGTGGGACTGCACTCATGAAATCTGCTTGTGTTGTTTTAACAAGGTCATATGATTCTTTATTGGGAAGCCCTATTTTGCTTCGATTGATTCCAGCCCTTGGTATTATTGCCTTTGCTGTTTATGGGATTGAGCCACTACTTCGTCTCAGCAGGATTCTATTTTTTCAAAGGACTGACAGCAGTTGGAAGAAAAGTAGTTCGCGATATGTCATGACATCTTATTTTCAGCCGTTATTATTGTGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCAATAATCCTGCCATCTCAGACTAGTCAGGTCGTTAAGCAACGACTGCTTAATTTTGTGAGATCTTTGTCAACAGTAATTTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCTCAAAAATTCTTTCTGGATGCAAATGAATCCAGTGATGCAAGAAATATGGGCCTTGATTTTGCTGGGAAAGCAATATACACTGCTGTTTGGGTTGCTGCTGTGTCATTATTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTTGCCGGTCGAGAGATATTTACGAACTTCCTTTCAAGTATAATGATCCATACAACTCGGCCATTTGTATTGAATGAGTGGATTCAAACAAAGATTGAGGGATATGAGGTTTCTGGCACAGTTGAGCATGTGGGCTGGTGGTCACCAACTATTATCAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTGAGAAATCTGACTCAGAAATCTCATTGGCGTATCAAGAGCTACATTTCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTGGAGCAACAGAAATTGCACAGAAGGGTCTTTTTGGAAGACATTAATCCTGAAAACACAGCTTTGAAGATATTGATATCATGCTTTGTGAAAACTTCACATTTTGAGGAGTACCTTTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCCGGTTAGCCACTCCCATCCGGACAGTTCAGAAAATATACAGTGAGCCTGCCTCGGAAAATATACCCTTTGGGGATTCCATTTTCACTCGATCCAGAGCAGCAGTGAATCGCCCGTTCCTACTAATAGAGCCACCGTATAAAGTTAATGGTGAAGATAAAGCTAAGCCGTCAACTCGTTCAACTCGTGGCAATGAGGAAAAAGATGCCAAGGTTGATGAACCTGTGGCATCAGACTCCAAAAGTGATGAAAATTTTGCAGGAACATCAACTTCTCCATCTAGTGTAAACTCCAAGGATAAGTCCAAGTCAAAGTCTGATGCCCAAACCCAGAACATGGGTTCTGATAGTTCAGTGGAGAAGACCTCCAAAACAATGCAACCTAAAAAAGAAACTGCAGGAGATGTAGGAAAAGGAAGCACAATTCCTGTACCTAAAACCCCTGCACATAATGTTGTATCTGAAACTTTGCCTGTCATTACTAACCATGAGTCTAGCAGGGCAGACACTGCTTCTGCTACTTCACAGTCAAAGCAAGATGAAGAGAAATCCTCGGTACCATCATCAGCAGTTAGACCTCCCTTAGAAGAGAATATTCTTCTTGGGGTTGCACTTGAAGGCTCAAAAAGAACGCTTCCAATTGAGGAAGAAATGAATCCATCTCCTAACTCGGCTGAGTCACAAGAGTTTGCTGTCCAACGGAATGGGAATGGACCTCCTGCTAACAAAGATAAGAAGGATGGTCCAACCTCTTCATTTCCAAATGCTAAGCAAAATGACTAG 2163 0.423 MNLCFKSSISTMAYPGSMQFSRDVRLKSSNNGPRSFQHHNPARVGRLHLVTTNLLPRTLKQDSLSHHLLRGVHAPIRHASSRCSIFVCRSAILPGGGGSGTALMKSACVVLTRSYDSLLGSPILLRLIPALGIIAFAVYGIEPLLRLSRILFFQRTDSSWKKSSSRYVMTSYFQPLLLWTGAMLICRALDPIILPSQTSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLDANESSDARNMGLDFAGKAIYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHTTRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYISISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLEDINPENTALKILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEPASENIPFGDSIFTRSRAAVNRPFLLIEPPYKVNGEDKAKPSTRSTRGNEEKDAKVDEPVASDSKSDENFAGTSTSPSSVNSKDKSKSKSDAQTQNMGSDSSVEKTSKTMQPKKETAGDVGKGSTIPVPKTPAHNVVSETLPVITNHESSRADTASATSQSKQDEEKSSVPSSAVRPPLEENILLGVALEGSKRTLPIEEEMNPSPNSAESQEFAVQRNGNGPPANKDKKDGPTSSFPNAKQND 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07061 720 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 12 712 IPR045042 -
Mepo3g07061 720 MobiDBLite consensus disorder prediction 508 720 - -
Mepo3g07061 720 MobiDBLite consensus disorder prediction 614 646 - -
Mepo3g07061 720 Pfam Mechanosensitive ion channel 253 460 IPR006685 GO:0016020|GO:0055085
Mepo3g07061 720 MobiDBLite consensus disorder prediction 542 559 - -
Mepo3g07061 720 Gene3D - 312 367 IPR023408 -
Mepo3g07061 720 Gene3D - 207 310 - -
Mepo3g07061 720 MobiDBLite consensus disorder prediction 509 540 - -
Mepo3g07061 720 MobiDBLite consensus disorder prediction 677 695 - -
Mepo3g07061 720 MobiDBLite consensus disorder prediction 567 582 - -
Mepo3g07061 720 SUPERFAMILY Sm-like ribonucleoproteins 296 366 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07061 Mepo-Chr3 84272685 84280146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07061 38 692 Mechanosensitive Ion Channel Family AT1G58200 56.101 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07061 K22047 - gmx:100796022 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07061 3 84272685 84280146 Mepo3g07061 3 84272685 84280146 ECH