Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07054 ATGCCAGAAAAGAAGTCTAAGAAAGTTACCTTCTCTGAAAACGCGATCGCCACAATCACACAACGGTATGACGTAGCGACTGTGTTGACGGTGTTTCAGGAATTATCACATTACGCTGCTGACGAGAATTTTAATTGGAATGAATTGGTGAAGAAAACCACCACTGGTATTTCTACTGCCAGAGAATATCAGATGCTATGGCGTCACTTGGCGTATGGTTATTCCTTTCCCGAAGATCTCGATCAAGAAGCTCAACCTTTGGATGATGATAGTGACCTAGATTGCGAGCTGGAATCATTACCTTCTGGATGTGCGGAATCTACATCAGAGACTTCAGCATGTGTGAAGGTGATAATTGCTTCCCGCACACTAAGTGAATCTACCCCCAGTAGCGCAACAATTGAGGCTCCAATGACTGTAAATTTTCCCGTTTGCCATTCATCACGAACTTCAAAGATTTCGCAGCCCTCTATCTTGATGGATCAGTCAAGCATTATGTTTCCAGTTACTGTCCCGAGACAGACACTGCCAACTGTATCATCAACTGATGCTTTAGAAACCAAGGTAACAATTGGTGGTACCGCAGCTTCCAAAAGGAAAAGAAAAGCATGGTCAGAGGAAGAGGACAATTTGCTACGGGATGCTGTTCAGAAATGGGGTGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAGCTTTCCTATTAAGAGAAGTGCAACACAATTGTCTCAGAGGTGGAGCGCTTTAAGAAAGAAAGACGGCAGTGCCAATCCAGGACCCACCGTGACCACTGTGACCACCAACACACAGTATACTGCCGAACAGTTGGCAACTCGTCACTCCTTAAATTTAGCCCTTGACATGCCATTCAAAAAGTTAACCGCTCCTGGAGTGACTGATCCTGGTAGGACATCCACATCAATAAAAAATCAAGTGCAGCCTCGTAATACGGCGCAAGTCTCCACAATTCATGGTTCTGTACCACCTCAACGTCCGGCTCAACAAGCTTCTGGTTCCCCTACGAAACCCAAACTGGCCTCTGAAAATTCAGTCTCAAAGTGTAATGCAATGTCAGCTCGTGAATCAAAACCTGCCATTGTTCATTCTGGAGCACAAACACAAACTGTTTCGCGAACAAATGCTGCGCCACAAGTGATGGTTTCTCAAGTGAAAAATGTGGCACATACTGTTCCTGCTGGCAGTACTTTGACAAAGACACCCATTTCTGCTGGTTTGCACCAAAAGATTCGTTCAAATGTTCCCGCTGGTAGTTCTTTGACAAAGACACCCATTCCTACTGGTTTGGCGCCTGTTCAGCCAAATGTGCCCGATGGTAGGTCTTTATCAAGGACACCCGTTTCTGCTGGTTTTCCTTCTAACCAAAAGGTTCATTCAAATGTGCATGCTGGTGGTTCTTTGACGAAGACACCCATTTCTGCTGGTTTGCCTTCTAACCAAAAGGTTTATTCAAATGTGCCTGCCGCTAGTTCTTTGACGAAGACACCCAACTCTGCCGGTTTGCCTTCTGACCCAAAGGTTCATTCAAATGTAGCTGCCGGTAGTTCTTTGACAAAGACACCCATTTCTGCTGGTTTGCCTTCTAACCAAAAACATTCAAATGTACTTGCTGGCAGTTCTTTGACAAAGCCACCCATTTCTGTTGGTTTGCCTTCTGACCCAAAGGTTCATTCAAATGTGTCTACTGGTAGTTCTTTGACAAAGCCATCCATTTCTGCTGGTTTGCCTTCTAACCAAAAGGTTCATTCAAATGTGCCTACCGGTAATTCCTTGACAAAGACACCCATTTCTTCTGGTTTGCCTTCCAACCAAAAGGTTCATTTAAATGTGTCTGCCGGTAATTCTTTGACGAAGACACCCATTACTGCTGGTTTGCCTTCTAATCAAAAGGCTCATTCAAACGTGCCTGCCAGCAGTTCTTTGACGAAGACGCCCATTTCTGTTGGTTTGCCTTCTAACCAAAAGGCTCATTCAAACGTGCCTGCCGGCAGTTCTTTGACGAAGACACCCATTTCTGTTGGTTTGCCTTCTGACCAAAAGGTTCATTTAAATGTCCATGTTGCTAGTTCTATGACAAAGACACCCATTTCTGCTAGTTTGCCTTCTAACCAAAAGGTCCATTCAAATGTACCTGTCAGTAGTTCTTTGACGAAGACACCCATTTCTTCTGGTTTGTCTTCTGACAAAAAGGTTCATTCAAATGTACCTGTTGCTAGTTCTCTGACAAAGACACCCATTTATGCTGGTTTGCCTTCGAACCCAAAGGTTCATTCAAATGTGCCTGTGGGTAATTCTTTGACAAAGACACCCATTTCGGCTGGTTTGCCTTCTGACCCAAAGGTTCATTCAAATGTGCCTGTTGGTAATTCTTTGACAAAGACACCCGTTTCCGCTGGTTTGCCTTCCGACCCAAAAGTTCATTCAAATGTGCCTGCTGATAATTCTGTGACAAAGACACCCATTTCGCCTGGTTTGCCTTCTGACCCAAAGGTTCATTCAAATGTGCCTGCTGGTAATACTTTGACAAAGACACCCATTTCCGCTGGTTTGCCTTCTAACCCAAAGGTTCATTCAAATGTGGCTGCTGGTAATTCTTTGACAAAGACACCCATTTCCGCTGGTTTGCCTTCGGACCCAAAAGTTCATTCAAATGTGCCTGCTGATAATTCTTTGACAAAGACACCCATTTCCGTGGGTTTGCCTTCTGACCAAAAGGATAAACATGTTACCTCTGTGAAAGAAGAGGAAAAAAGACTCGCTGGGCCTGGCTCCACACCAAAAGAGAATGTGAAAGAAGAGGAAGCTTCTACATCTACTACCGAGGGCCAGGTAAATAGCAAACTGGATAAGGCGAGGCTAGATTTAGATAAAGCTAAAAGCATGCCCAGTGAGAAAGTTTTGGAACACAAAGCAGTGCCTCAAAATCCTGTAGGGTGTGAAGAGCGAGGAAGTGTTAAGAATTCAAATTTTACCCCCAACAAGGCCACTGAGAATGGAAATGACAATTTGAATAAGGAAAGTCAAAATCTAAATCAAGACAAGAAGACAAGCTCTGTTAATGAAAACTCTCAGCATCAGAACATGACAGAGAAACTTGTAAATTTGCCAAAACAAGATGAATGCCGTCAAGGTTTGGAAGTGCCGTGA 3165 0.4411 MPEKKSKKVTFSENAIATITQRYDVATVLTVFQELSHYAADENFNWNELVKKTTTGISTAREYQMLWRHLAYGYSFPEDLDQEAQPLDDDSDLDCELESLPSGCAESTSETSACVKVIIASRTLSESTPSSATIEAPMTVNFPVCHSSRTSKISQPSILMDQSSIMFPVTVPRQTLPTVSSTDALETKVTIGGTAASKRKRKAWSEEEDNLLRDAVQKWGEGNWATMAKGDSFPIKRSATQLSQRWSALRKKDGSANPGPTVTTVTTNTQYTAEQLATRHSLNLALDMPFKKLTAPGVTDPGRTSTSIKNQVQPRNTAQVSTIHGSVPPQRPAQQASGSPTKPKLASENSVSKCNAMSARESKPAIVHSGAQTQTVSRTNAAPQVMVSQVKNVAHTVPAGSTLTKTPISAGLHQKIRSNVPAGSSLTKTPIPTGLAPVQPNVPDGRSLSRTPVSAGFPSNQKVHSNVHAGGSLTKTPISAGLPSNQKVYSNVPAASSLTKTPNSAGLPSDPKVHSNVAAGSSLTKTPISAGLPSNQKHSNVLAGSSLTKPPISVGLPSDPKVHSNVSTGSSLTKPSISAGLPSNQKVHSNVPTGNSLTKTPISSGLPSNQKVHLNVSAGNSLTKTPITAGLPSNQKAHSNVPASSSLTKTPISVGLPSNQKAHSNVPAGSSLTKTPISVGLPSDQKVHLNVHVASSMTKTPISASLPSNQKVHSNVPVSSSLTKTPISSGLSSDKKVHSNVPVASSLTKTPIYAGLPSNPKVHSNVPVGNSLTKTPISAGLPSDPKVHSNVPVGNSLTKTPVSAGLPSDPKVHSNVPADNSVTKTPISPGLPSDPKVHSNVPAGNTLTKTPISAGLPSNPKVHSNVAAGNSLTKTPISAGLPSDPKVHSNVPADNSLTKTPISVGLPSDQKDKHVTSVKEEEKRLAGPGSTPKENVKEEEASTSTTEGQVNSKLDKARLDLDKAKSMPSEKVLEHKAVPQNPVGCEERGSVKNSNFTPNKATENGNDNLNKESQNLNQDKKTSSVNENSQHQNMTEKLVNLPKQDECRQGLEVP 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07054 1054 SMART sant 200 252 IPR001005 -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 789 803 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 299 357 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 839 878 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 623 649 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 987 1039 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 889 905 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 758 1054 - -
Mepo3g07054 1054 Gene3D - 194 255 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 420 517 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 702 737 - -
Mepo3g07054 1054 SUPERFAMILY Homeodomain-like 199 252 IPR009057 -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 763 778 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 560 611 - -
Mepo3g07054 1054 CDD SANT_TRF 202 251 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 527 546 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 444 517 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 953 972 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 420 434 - -
Mepo3g07054 1054 ProSiteProfiles Myb-like domain profile. 196 250 IPR001005 -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 814 828 - -
Mepo3g07054 1054 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 254 IPR017930 -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 295 377 - -
Mepo3g07054 1054 Pfam Myb-like DNA-binding domain 201 246 IPR001005 -
Mepo3g07054 1054 Coils Coil 999 1026 - -
Mepo3g07054 1054 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 581 - -
Mepo3g07054 1054 MobiDBLite consensus disorder prediction 912 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07054 Mepo-Chr3 84209786 84217449 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g07054 Myb_DNA-binding 5.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07054 - - mtr:11429657 1877.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07054 3 84209786 84217449 Mepo3g07054 3 84209786 84217449 ECH