Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07044 ATGGCGGAACAACCTCTTCCATCTGAGGATCCTGCAACAATTCCATCTATTGATGATGACGACGACGATGAGGACTACACTGATGATGGTGATGATACTATGGATGAATTGGATGAAGAAACAAATGGTAATTCAGTGAACGTTGAAGGTACTTCAATTCCTGCAACTGCAACTACAACTGCAGCTGCAACGCGTATTGGTGAACTCACTCTTTCTTTTGAAGGCGAGGTTTATGTCTTCCCCGATGTCACACATCAGAAGGTGCAAGCTGTTTTGCTGTTTTTGGGAGGAAGTGGTGCGCAGCCAGGCATACCTACAGCTGAACTGCCATTTGATCAGAGTAACAGGGGCATGGGCGGTATTGGAAAGCTTCCAAATCTTTCACGAAGAATAGCCTCCTTGGTCAGGTACCGTGAAAAACGCAAGGAAAGATGTTTTGACAAGAAAATTAGATACACCGTGAGAAAAGAGGTGGCAGAAAGGATGCATCGGGAAAAGGGGCAGTTTGCACCCTTGAAGCAAAGCCCTGGTTCCTCGAGCTGGAATTCAGCACAGGGTGCTGGTCAAGATGGCAGTCCTAATCCTGAATCTCTACGTAGATGTCAGCATTGTGGAGTCAATGAAAATAATACTCCTGCAATGCGCCGCGGACCAGCTGGACCAAGAACTTTATGTAATGCATGCGGCCTCATGTGGGCCAACAAGGGGACACTCAGAGATCTCAGTAAGGGTGGAAGAAATCTTTCTGTTGAGCAAAGTCGTCCGGACCCTCCTGTTGATGTCAAGCCAACTGTTCTTGAAGGGGAATTCTCTGTCATTGAAAATGAACAAGGTATTTCTGAAGAACCTTCCAAGACTGTTGGTGCTGAAGGTTTGAATGATCATGCATCAAACCCTGGTGATGAGGAATTGTCTGAATCTGCAGAACACCTAACAAAAACACTTCCATTGGTAATTGATCATTCTTCGGAAAATGATGATGAGCAGGAACCCGTGGTCGAGCTTTCTAATCCTTCAGATGCAGGAATGTCTAATCCTTCAGATACAGATATTGACATTCCTGGAAACTTTGAATAG 1077 0.4531 MAEQPLPSEDPATIPSIDDDDDDEDYTDDGDDTMDELDEETNGNSVNVEGTSIPATATTTAAATRIGELTLSFEGEVYVFPDVTHQKVQAVLLFLGGSGAQPGIPTAELPFDQSNRGMGGIGKLPNLSRRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFAPLKQSPGSSSWNSAQGAGQDGSPNPESLRRCQHCGVNENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNLSVEQSRPDPPVDVKPTVLEGEFSVIENEQGISEEPSKTVGAEGLNDHASNPGDEELSESAEHLTKTLPLVIDHSSENDDEQEPVVELSNPSDAGMSNPSDTDIDIPGNFE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07044 358 ProSiteProfiles CCT domain profile. 130 172 IPR010402 GO:0005515
Mepo3g07044 358 MobiDBLite consensus disorder prediction 242 263 - -
Mepo3g07044 358 Gene3D - 197 248 IPR013088 GO:0006355|GO:0008270
Mepo3g07044 358 Pfam tify domain 69 96 IPR010399 -
Mepo3g07044 358 CDD ZnF_GATA 200 244 IPR000679 GO:0006355|GO:0043565
Mepo3g07044 358 SMART tify_2 62 97 IPR010399 -
Mepo3g07044 358 MobiDBLite consensus disorder prediction 1 56 - -
Mepo3g07044 358 SMART GATA_3 195 248 IPR000679 GO:0006355|GO:0043565
Mepo3g07044 358 PANTHER GATA TRANSCRIPTION FACTOR 28 15 343 IPR045280 GO:0006355
Mepo3g07044 358 Pfam CCT motif 130 170 IPR010402 GO:0005515
Mepo3g07044 358 ProSitePatterns GATA-type zinc finger domain. 201 228 IPR000679 GO:0006355|GO:0043565
Mepo3g07044 358 MobiDBLite consensus disorder prediction 14 39 - -
Mepo3g07044 358 MobiDBLite consensus disorder prediction 163 199 - -
Mepo3g07044 358 ProSiteProfiles GATA-type zinc finger domain profile. 195 254 IPR000679 GO:0006355|GO:0043565
Mepo3g07044 358 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 245 - -
Mepo3g07044 358 ProSiteProfiles Tify domain profile. 62 97 IPR010399 -
Mepo3g07044 358 MobiDBLite consensus disorder prediction 40 56 - -
Mepo3g07044 358 MobiDBLite consensus disorder prediction 172 196 - -
Mepo3g07044 358 Pfam GATA zinc finger 201 237 IPR000679 GO:0006355|GO:0043565
Mepo3g07044 358 MobiDBLite consensus disorder prediction 275 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07044 Mepo-Chr3 84048461 84058347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07044 68 243 Tify Gene Family AT1G51600 55.080 7.03e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo3g07044 CCT 4.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07044 - - gmx:100801328 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07044 3 84048461 84058347 Mepo3g07044 3 84048461 84058347 ECH