Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07038 ATGGAAGGATCAGCTGGCCCTGGTGGTGGAAACGTGAACGCGTTTCTACGAAATTATAAAATAGGAAAAACACTTGGCATAGGGTCTTTTGGCAAAGTGAAAATTGCAGACCATGTATTGACGGGTCAAAAGGTTGCCATAAAGATTCTTAGCTGCAGCAAGATGAAGATCATGAAAATGGAAGAAAAAGTTAGAAGAGAAATAGAAATTTTAAAAATGTTCATGCATCATCACATTATACGCCTTTATGAGGTTGTAGAAACCTCGACAGACATATATATGGTGATGGAATATACGGAAAATGGAGAGCTATTTGACTACATAGCACAAAAGGGTAGGTTGCAAGAAAATGAAGCTCGCACGTTCTTCCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAAGAATATGGTAGCTCATAGAGACCTGAAATCTGAAAATATACTTTTGGACTCAAAAAAGAGTGTCAAAATTGCTGATTTTGGATTGAGCAACATCATGCGTGATGGTCACTTACTTAAGACAAGTTGTGGAAGCCCTAACTATGCAGCTCCAGAGGTTATCTCTGGGAAATCATATATTGGACCTGAAGTAGATGTTTGGAGTTGTGGTATAATTTTATACGCGCTTCTCTGTGGCACTCTTCCTTTCGATGATGTTAATACTCCAAAACTCTTCAGAAAAATAATGGTTGGGATGTATACTTTTCCAAGTCATCTTTCTCCTGATACCAGGGATTTGATAGCAAGGTTGATTGTGGTTGATCCCATGAAAAGGATGACCATACATGAGATACGCCAACATCCATGGTTCAAAGTTGGTCTGCCACGTTATTTGGCGGTGCCACCGCCAAATACACTTCAACAGATTGATGTGGAGATTCTTCAGGAGGTGGTTAATAGGGGATTTGACAAGAATCAATTGATTGAGTCCCTTAGCAACAGGGTGCAAAATGAGGGTACTGTAACATACCATTTGTTATTGGACAATCGTTTTCGTGTTTCCACTGGCTATTTTGGAGCTGAGTTTCAAGAGACAATGGATTCTAGGAACCATATCCACTCTGGTGAAGTTGCTTCTCCAGTTGGTGGGCACTGCTTTTTAGGGAATATGGATTATCAAGGAGTAGGAATGAGGCACCAGTTCCCTGTTGAGAGAAAATGGACTCTTGGCCTTGAGTCTCAAGCCCAACCTCATGAGATAATGACTGAGGTCCTTAAAGCTCTGGAACAATTGAATGTTTCTTGGGAAAAAATTGGACCCTATAAGATGAAGTGCAGAAGTGATGTTGGCATCCTTGGTCATCATGGAGGAATGGTTATCAATTATGTGGTCCTGTTCAAAGTGCAGTTGTACAAAACTCAGGAGAAATATCTACTTGACCTTCAAAGGGTTGAGGGTGCTCAGCTTCTTTTCTTGGATCTTTGTTCTGCCTTCCTTGCGCAGCTTCGCGTTCTCTAG 1461 0.4107 MEGSAGPGGGNVNAFLRNYKIGKTLGIGSFGKVKIADHVLTGQKVAIKILSCSKMKIMKMEEKVRREIEILKMFMHHHIIRLYEVVETSTDIYMVMEYTENGELFDYIAQKGRLQENEARTFFQQIISGVEYCHKNMVAHRDLKSENILLDSKKSVKIADFGLSNIMRDGHLLKTSCGSPNYAAPEVISGKSYIGPEVDVWSCGIILYALLCGTLPFDDVNTPKLFRKIMVGMYTFPSHLSPDTRDLIARLIVVDPMKRMTIHEIRQHPWFKVGLPRYLAVPPPNTLQQIDVEILQEVVNRGFDKNQLIESLSNRVQNEGTVTYHLLLDNRFRVSTGYFGAEFQETMDSRNHIHSGEVASPVGGHCFLGNMDYQGVGMRHQFPVERKWTLGLESQAQPHEIMTEVLKALEQLNVSWEKIGPYKMKCRSDVGILGHHGGMVINYVVLFKVQLYKTQEKYLLDLQRVEGAQLLFLDLCSAFLAQLRVL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07038 486 Pfam Kinase associated domain 1 445 485 IPR001772 -
Mepo3g07038 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mepo3g07038 486 CDD UBA_SnRK1_plant 290 330 - -
Mepo3g07038 486 CDD STKc_AMPK_alpha 16 271 - -
Mepo3g07038 486 CDD AMPKA_C 385 483 - -
Mepo3g07038 486 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07038 486 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 289 329 IPR015940 -
Mepo3g07038 486 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Mepo3g07038 486 Gene3D Transferase(Phosphotransferase) domain 1 10 352 - -
Mepo3g07038 486 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07038 486 FunFam Non-specific serine/threonine protein kinase 9 100 - -
Mepo3g07038 486 FunFam Non-specific serine/threonine protein kinase 391 484 - -
Mepo3g07038 486 Gene3D Kinase associated domain 1, KA1 391 484 - -
Mepo3g07038 486 SUPERFAMILY KA1-like 325 485 IPR028375 -
Mepo3g07038 486 FunFam Non-specific serine/threonine protein kinase 11 339 - -
Mepo3g07038 486 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 438 485 IPR001772 -
Mepo3g07038 486 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07038 486 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 17 313 - -
Mepo3g07038 486 SUPERFAMILY Protein kinase-like (PK-like) 16 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07038 Mepo-Chr3 84013201 84016855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07038 19 271 CBL-interacting serine-threonine protein kinases AT4G24400 48.819 4.57e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mepo3g07038 Pkinase 7.3e-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07038 K07198 - mtr:11429829 829.706