Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07016 ATGGCTCTTGAAACTGTGGTTTTCCCACAACAAGATCCATTCACATATAGTTACAAAGACAATTACTTCAACTCTTATGATCATCTTCATGCGGAAGAACAAGAGAATGTTCTCCTAGGAATCATCAACAATGAACAACAAAATCTCCATGCAAACTGGGATTCTTGTTCTGTTAAGGATCATCAATGGGAATATTCACACTCTTCCTCTCCTGAAATCTGCACGGTTGATCAAACTATCACGGCACCTACCTTCACTCCTCCTCCTTCTTCCACCGTGGAAGCTACAGTAACTGCAACGTGTAGGAGAAAGCGACGTCGTATCAAGAGTGCAAAGAACAAAGAGGAGATTGAAAATCAAAGGATGACTCATATTACTGTTGAACGCAATCGAAGAAAACAAATGAATGAGTATTTGAATGTGCTTCGATCTTTGATGCCTTCTTCTTATGTTCAAAGGGGTGACCAAGCTTCTATTATTGGAGGAGCAATAAACTTTGTGAAGGAGTTAGAACAACATTTACAGTCTATGGGGGGCCAAAAGAAAACGAAACAACCAAACGAGAACATAGGCTTAAATAATGGACCACCTTTTGCTGAATTCTTCACTTTTCCTCAGTACACAACAAGTGCAACTCAGAACAACAACAACACGGTCACAATGGAACAACACAATTACCAAGAACAGAAACAATGGGCTGTGGCAGATATTGAAGTCACAATGGTAGATAGTCATGCCAACATGAAAATTCTATCCAAGAAAAAACCAGGACAACTTATGAAGATTGTTGTTGGGTTACAAAATCTTAGGCTAACCATTCTTCATCTTAATGTTACCACGGTCGATGATATGGTTCTTTACTCAGTTAGTGTCAAGGTAGAGGAGGGGAGTCAGCTGAATAGTGTGGATGAAATTGCGGCTGCTGTGAATCAACTATTAAGGACGGTCCAACAAGAACTGGCTTATCAACTAAATTGA 978 0.3978 MALETVVFPQQDPFTYSYKDNYFNSYDHLHAEEQENVLLGIINNEQQNLHANWDSCSVKDHQWEYSHSSSPEICTVDQTITAPTFTPPPSSTVEATVTATCRRKRRRIKSAKNKEEIENQRMTHITVERNRRKQMNEYLNVLRSLMPSSYVQRGDQASIIGGAINFVKELEQHLQSMGGQKKTKQPNENIGLNNGPPFAEFFTFPQYTTSATQNNNNTVTMEQHNYQEQKQWAVADIEVTMVDSHANMKILSKKKPGQLMKIVVGLQNLRLTILHLNVTTVDDMVLYSVSVKVEEGSQLNSVDEIAAAVNQLLRTVQQELAYQLN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07016 325 PANTHER MAX DIMERIZATION, MAD 36 319 - -
Mepo3g07016 325 CDD bHLH_AtFAMA_like 122 189 - -
Mepo3g07016 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 119 170 IPR011598 GO:0046983
Mepo3g07016 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 185 IPR036638 GO:0046983
Mepo3g07016 325 SMART finulus 125 176 IPR011598 GO:0046983
Mepo3g07016 325 Gene3D - 109 187 IPR036638 GO:0046983
Mepo3g07016 325 Pfam Helix-loop-helix DNA-binding domain 120 171 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07016 Mepo-Chr3 83772496 83774896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07016 1 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 47.170 3.54e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g07016 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07016 - - gmx:100789380 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07016 3 83772496 83774896 Mepo3g07016 3 83772496 83774896 ECH
Mepo7g01580 7 24872871 24874524 Mepo3g07016 3 83772496 83774896 PCT