Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07006 ATGGCTATGCCGATCATCAGAAGCGTTACAAGGGAATATATTGGCAAGCCACTAAAATGCAAAGCTGCAATATGCAAAAAATCAGGTGAACCCCTTGTCATAGAGGAAGTTGAATTAGACCCACCTAAATCATGGGAAGTACGGATCAAAATATTATGCACATCTCTCTGCCACTCTGATGTCACCTTTTGGAAAATGGATTCTTCAGCACCTACTGCTATGTTTCCAAGAATTCTAGGACACGAAGCTGTGGGAGTCGTGGAGAGTGTAGGGGAGAATGTGGAAGAAGTGAAAGAGGGTGACTTGGTCGTTCCGGTGTTCCTCCCAAACTGTGGTGAATGCATCGACTGCGAGAGCACAAAGAGCAACAATTGCACAAAGTTTGGGAACAAACGGATCCGTGACATGCCAAGAGATGGAACAAGCAGGTTTAGGGACATGAATGGGGAAGTGGTGCACCATTTATTGGGTGTTAGTAGCTTTTCTGAGTACACAGTGGTGGATGTAACCCATGTGGTTAAAATAACTCAAGAGATTCCTCTTGATAAGGCTTGCTTGCTCAGTTGCGGTGTTTCCACAGGGATAGGGGCAGCTTGGAAGGTGGCGGATGTAGAAAAAGGGACCACGGTGGCTATTTTTGGGCTTGGTGCTGTAGGCTTGGCTGTTGCTGTAGCAGCAAAACAACGAGGAGCTTCGAAGATTATAGGCATTGATTTAAATCAGGACAAATTTGAAATAGGAAAACAATTTGGAATAACTGATTTTGTGAATCCCTCCACCTGCAACGACAAATCTGTAAGCGAGGTGATTAAGGATATGACAAATGGAGGAGCTGATTATTGCTTCGAATGCATAGGCTTGGCATCACTAATGGCAGAGGCTTTTAATAGCAGTCGAGAAGGTTGGGGAAAAACGGTGATAATTGGGGTGGAAATGCACGGTTCGCCATTGACCTTAAATCCTTATGACATTCTAAAAGGCAAAACCATCACCGGGTCACTATTTGGAGGCTTGAAGCCAAAATCTGATCTTCCCCTCCTTGCTCAGAAATACTTAGACAAAGAACTTAACTTGGATGGCTTCATATCACAAGAGGTGGACTTCAAGGATATTAACAAAGCTTTTGATTATCTCCTTCAAGGAAAGAGTATCCGTTGCATTATAAGGATGGATCATTAA 1179 0.436 MAMPIIRSVTREYIGKPLKCKAAICKKSGEPLVIEEVELDPPKSWEVRIKILCTSLCHSDVTFWKMDSSAPTAMFPRILGHEAVGVVESVGENVEEVKEGDLVVPVFLPNCGECIDCESTKSNNCTKFGNKRIRDMPRDGTSRFRDMNGEVVHHLLGVSSFSEYTVVDVTHVVKITQEIPLDKACLLSCGVSTGIGAAWKVADVEKGTTVAIFGLGAVGLAVAVAAKQRGASKIIGIDLNQDKFEIGKQFGITDFVNPSTCNDKSVSEVIKDMTNGGADYCFECIGLASLMAEAFNSSREGWGKTVIIGVEMHGSPLTLNPYDILKGKTITGSLFGGLKPKSDLPLLAQKYLDKELNLDGFISQEVDFKDINKAFDYLLQGKSIRCIIRMDH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07006 392 Gene3D - 194 333 - -
Mepo3g07006 392 FunFam Alcohol dehydrogenase 6 23 208 - -
Mepo3g07006 392 SUPERFAMILY GroES-like 341 389 IPR011032 -
Mepo3g07006 392 Pfam Alcohol dehydrogenase GroES-like domain 46 175 IPR013154 -
Mepo3g07006 392 SUPERFAMILY GroES-like 15 200 IPR011032 -
Mepo3g07006 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 179 353 IPR036291 -
Mepo3g07006 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 80 94 IPR002328 GO:0008270|GO:0016491
Mepo3g07006 392 Pfam Zinc-binding dehydrogenase 217 340 IPR013149 -
Mepo3g07006 392 Gene3D - 25 386 - -
Mepo3g07006 392 FunFam S-(hydroxymethyl)glutathione dehydrogenase 194 333 - -
Mepo3g07006 392 PANTHER ALCOHOL DEHYDROGENASE 15 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07006 Mepo-Chr3 83668217 83672654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07006 46 277 Monolignol Biosynthesis Gene Families AT4G37970 27.237 2.90e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07006 K00121 - zju:107420743 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07006 3 83668217 83672654 Mepo3g07006 3 83668217 83672654 ECH