Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06993 ATGGAGAGCAACAACAACCAGCAACAACAATATCCAACACCTTCATCCACGGCAGTTACACCACCACCATTCCAACATCTTCTCCAACAACAACAACAACAGCTTCAAATGTTCTGGTCCTACCAACGTCAAGAAATCGAACACGTCAACGACTTCAAAAACCATCAACTTCCATTGGCACGCATTAAGAAAATCATGAAAGCTGATGAAGACGTTCGCATGATTTCTGCAGAAGCACCGATTCTCTTTGCCAAAGCTTGTGAGCTTTTCATTCTTGAACTCACCATTCGTTCTTGGCTTCACGCTGAAGAGAATAAAAGACGAACTCTTCAGAAAAATGATATTGCTGCTGCTATTACTAGGACTGATATTTTTGATTTTTTGGTTGATATTGTTCCGAGAGATGAGATTAAAGATGAAGGTGCTGCTGCTATTGTTGGTGCTGCTGCTAGTGGTGTTCCTTATTATTATCCTCCTATGGGACAACCTGCTGGAATGATGATTGGTCGTCCGGCTGTTGATCCGGCTACCGGTGTTTATGTTCAGCCGCCTTCTCAGGCTTGGCAGTCTGTTTGGCAGACGGGCGCGGATGATGGTTCTTATGCTGGTGGTGGTGTTGGCAGTGGTCAGCACAATGGCGATGGTCAGAGCTGA 654 0.4511 MESNNNQQQQYPTPSSTAVTPPPFQHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEGAAAIVGAAASGVPYYYPPMGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQTGADDGSYAGGGVGSGQHNGDGQS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06993 217 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g06993 217 MobiDBLite consensus disorder prediction 193 217 - -
Mepo3g06993 217 FunFam Nuclear transcription factor Y subunit gamma 25 134 - -
Mepo3g06993 217 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 20 147 - -
Mepo3g06993 217 SUPERFAMILY Histone-fold 20 128 IPR009072 GO:0046982
Mepo3g06993 217 Gene3D Histone, subunit A 23 134 IPR009072 GO:0046982
Mepo3g06993 217 Pfam Core histone H2A/H2B/H3/H4 26 119 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06993 Mepo-Chr3 83544076 83547450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06993 24 199 CCAAT-HAP5 Transcription Factor Family AT3G48590 85.792 7.65e-103 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo3g06993 Histone 1.4e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06993 - - gmx:100818447 343.969