Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06975 ATGGGCAGTATAAAGGGAAAATGTAAGAAGAATAAGATATTGAAGGCATGGCGATCATTAGGACGTGGAGGTGACAATAGCAATATGAGGTCACTACTTTTGAATAAGGGTAGTTCCAAATCATTTTCAGAAAATGCGAAGGGTCAAATTGTAAAATTTCCCAAGGGTTGTTTTACAGTTTATGTTGGACTCCAAAGTCAAAGGTTTGTTGTGAAAACCAAGTTTGTTAATCACCCAAAATTCAAGACGTTACTGGATGAAGCAGAAGTTGAATATGGGTTTCAAAATGATGGCCCTATTAGGCTTCCATGTAACGTTGATATGTTCTATAGAGTGTTGGATGAGATGAACAATATTGAAGAAGATTATAACATTAATAATTGTACTTGTAGAAGCTTTATGAAGGCTATGGGGTTGTCTTTTTTTTGTTCTTCGAAACCACACTCATGCGTAGGAGGCATGGAAAGTGTAAAGTGCTATTGA 483 0.3623 MGSIKGKCKKNKILKAWRSLGRGGDNSNMRSLLLNKGSSKSFSENAKGQIVKFPKGCFTVYVGLQSQRFVVKTKFVNHPKFKTLLDEAEVEYGFQNDGPIRLPCNVDMFYRVLDEMNNIEEDYNINNCTCRSFMKAMGLSFFCSSKPHSCVGGMESVKCY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06975 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 112 IPR003676 GO:0009733
Mepo3g06975 160 Pfam Auxin responsive protein 47 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06975 Mepo-Chr3 83409152 83409877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06975 4 131 Calmodulin-binding Proteins AT2G24400 32.090 2.43e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06975 K14488 - cave:132173452 122.094