Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06967 ATGGAAAAGCTGAATTTAGTGAAAAATGGAGTAAGCAAATTGCCTCCTGGTTTTTGTTTTCAGCCAACGGACGAAGAGCTTGTCTTTCATTACTTGAAATGCAAGATCTTCTCCTATCAATTGTCTGCTTCAATTATTCCTGAGATCAATGTCTGCAAGTATGATCCTTGGGATTTGCCAGGAAATTGTGGTGAGCAAGATAAGTATTTCTTCAGCAGCAAGGAAGCTAAGTATCGAAACAGCAATCGCATGAACAGAACAACCAATTCTGGTTATTGGAAGGCCACAGGATCAGACAAGAAAGTTGGTGTTTCTTCATCACTAAGTAATGGAATTGCGGGAATAAGAAAAAGTCTTGTATTTTATCAAGGAAAATCTCCAAATGGATCTCGAACTCATTGGATCATGCATGAATATCGCCTAATTAGTGTAGAAACTACTGCTTGCAATCAGATGCAAAACTATGGAAACGAGATAGGGAACTGGGTTTTGTGTCGTATATTCACGAAGAAAAGAAGTAATATAGAAAACGGTTACATGATGAAGAGCAATATAGTGATGAATACTAATGTTGAGGTGGCTCAGCCAAGATTCTTTGATTTTATGAGGGTGCACAACTCAACTCCGGACCCTACTACTCATTTTTCTATATCCTCATCTTGTTCAAATTCCAGTGAGGTCTCTTCATCAGAAGAAAGATGCAGCGATATATATACTGATTTTTAG 726 0.3788 MEKLNLVKNGVSKLPPGFCFQPTDEELVFHYLKCKIFSYQLSASIIPEINVCKYDPWDLPGNCGEQDKYFFSSKEAKYRNSNRMNRTTNSGYWKATGSDKKVGVSSSLSNGIAGIRKSLVFYQGKSPNGSRTHWIMHEYRLISVETTACNQMQNYGNEIGNWVLCRIFTKKRSNIENGYMMKSNIVMNTNVEVAQPRFFDFMRVHNSTPDPTTHFSISSSCSNSSEVSSSEERCSDIYTDF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06967 241 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Mepo3g06967 241 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
Mepo3g06967 241 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 211 - -
Mepo3g06967 241 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
Mepo3g06967 241 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06967 Mepo-Chr3 83323695 83324854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06967 1 208 NAC Transcription Factor Family AT5G13180 51.111 3.23e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g06967 NAM 1.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06967 - - aprc:113868555 328.561