Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06965 ATGCTTCACATAAGTTATTCGTTTTGTTCTCTTCAATTCATGTTATCATTTTTAAATGGCATGTACCTCATGTTAACTCTAGGAAAACCAGTGATTGTTGATGCTGATAAAGTTACAACACTCAAAAGAGCAAAGTCTTTCAAAACATGTAATCCATCCTTTGTTGTTGTCATGGGTGCATCATACGTTGAGCACCATTTTCTTCTGAATATACCATCTATGTTCGGTAAGAGACACTTTAATTTGAATAAGAAGCGAGGAGATATTAATTTTCAAGTGTCAAATGACAGAGTTTGGCCTGCAAGGTACCTAATCAGGATGTCCCCTACAGGACTAAAATTTGAACTCTCAAGTGGATGGAAGACATTTGCAAAAGACAATAACTTGAAAGTTGGCGATGCTTGCAACTTTGAGCTCATTCTTAGTACTAATATGACTTTCCAAGTTCATATCTTCAGGGAGACAGATAAAGACAACGCAAATTGTTCTACATCTGGAAGTAGGATTAATTGGTGTTTAATTTTCTTTTCAATTCTTTTTCTCATATGA 549 0.3497 MLHISYSFCSLQFMLSFLNGMYLMLTLGKPVIVDADKVTTLKRAKSFKTCNPSFVVVMGASYVEHHFLLNIPSMFGKRHFNLNKKRGDINFQVSNDRVWPARYLIRMSPTGLKFELSSGWKTFAKDNNLKVGDACNFELILSTNMTFQVHIFRETDKDNANCSTSGSRINWCLIFFSILFLI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06965 182 ProSiteProfiles B3 DNA-binding domain profile. 54 155 IPR003340 GO:0003677
Mepo3g06965 182 SMART B3_2 54 155 IPR003340 GO:0003677
Mepo3g06965 182 Gene3D - 32 157 IPR015300 -
Mepo3g06965 182 SUPERFAMILY DNA-binding pseudobarrel domain 50 155 IPR015300 -
Mepo3g06965 182 Pfam B3 DNA binding domain 54 154 IPR003340 GO:0003677
Mepo3g06965 182 CDD B3_DNA 52 153 IPR003340 GO:0003677
Mepo3g06965 182 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 35 155 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06965 Mepo-Chr3 83318703 83319925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06965 22 156 B3 DNA Binding Superfamily AT3G18990 29.630 2.22e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo3g06965 B3 1.6e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06965 - - mtr:11434552 293.123