Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06963 ATGGGTTGCGTGCTTGGTACGCCGGCCAGTGACGGAGACAGAGATCAACGCCGTCAACGAAGAACTCAGCAGCGTAACGGTTCTTCTGAAGTAAATAATAATGTCGTTAGAGTTCGGGAGAGGCCAAAAAATCGACATACCGGAGATTTTCCGGTGAATCTCCCGGCGCTGGAGCGCCGGAAGCCTATGCTCGATCCGCTATCAGTGAACCAACAAGGTTGGCCGTCTTGGTTGATGGCTGTCGCCGGTGAAGCCATCGGAGATTGGACTCCTCGTCGCGCCAACTCGTTTGAAAAACTTGCTAAGATTGGGCAAGGGACATATAGTAATGTGTATAAAGCAAAAGACTTGGTTACTGGAAAGATAGTAGCATTGAAGAAAGTGAGATTTGATAATTTGGAGCCAGAGAGTGTGAAGTTTATGGCAAGAGAGATACTTGTTTTGAGGAAACTTGATCATCCAAATGTTGTAAAGCTTGAAGGATTGGTTACTTCTAGAATGTCATGTAGTCTTTATTTGGTATTTGAATATATGGAACATGATCTTGCTGGCCTTTCTGCTGGTCAAGGTGTTAAGTTCACTGAACCTCAGGTCAAATGCTTTATGAAGCAATTACTTTCTGGTCTTGAGCATTGCCACAGTCGAGGCGTACTGCATCGTGATATCAAGGGTTCCAATCTGCTTATTGATAATGAAGGAATCCTAAAAATTGCAGATTTTGGGCTAGCAACTTTCTATAATCCTAATAAAAAACAGAGCATGACAAGCAGAGTTGTGACACTTTGGTATCGACCCCCTGAGCTTCTTCTTGGAGCTACATTTTATGGTGTAGGTATTGACCTTTGGAGTGCCGGTTGCATTTTGGCAGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATTTTTAAGTTGTGTGGATCTCCAGCTGAAGAATATTGGCGGAAGCATAAATTGCCAAATGCTACAATCTTTAAGCCGCAACAGCCATATAAACGTTGTATCTCAGAAACATTCAAGGATTTTCCTCCATCATCACTACCTCTAATTGACAGTCTTCTTGCAATAGAACCCGATCGCCGTGGAACTGCCTCAGCTGCCCTAAATCATGAATTTTTTACCACTGAGCCCTATGCTTGTGAACCGTCAAGTTTGCCAAAGTATCCTCCTAGCAAAGAATTGGATGTTAAAATGAGAGATGAAGAAGCTAGAAGGCAAAAGGCACTAAATGGAAAAGCTAATGCAGTCGATGGTGCCAAAAGAGTCAGAGCACGTGAGCGTGGTCGAGCCATTCCCGCCCCAGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGGTGGAGAGTTGTGACCCATGGAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCACCTCATCAAGATGGAGCTGTTGGATATCCACAAGATGAATCAAGTAAAGGACCTGTTTCATTTGGTGCCCAGGACACATCCTTTAGTTCAGGGATATTCAATGTAAAACCATCTGGACCTACTAGAAGCCATGATGGTACTGGACTTCACAAAGGTACAAAAACTAAAAAAGAAGAGTCTCAGATGGCTTCATCATGGAAATTTATGCGTCCATTTAAGCCATCAACTATTGGACTTTCAATGGATTTATTATTTAGGAGCAAATAA 1683 0.4326 MGCVLGTPASDGDRDQRRQRRTQQRNGSSEVNNNVVRVRERPKNRHTGDFPVNLPALERRKPMLDPLSVNQQGWPSWLMAVAGEAIGDWTPRRANSFEKLAKIGQGTYSNVYKAKDLVTGKIVALKKVRFDNLEPESVKFMAREILVLRKLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLSAGQGVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYNPNKKQSMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPAEEYWRKHKLPNATIFKPQQPYKRCISETFKDFPPSSLPLIDSLLAIEPDRRGTASAALNHEFFTTEPYACEPSSLPKYPPSKELDVKMRDEEARRQKALNGKANAVDGAKRVRARERGRAIPAPEANAEIQTNLDRWRVVTHGNAKSKSEKFPPPHQDGAVGYPQDESSKGPVSFGAQDTSFSSGIFNVKPSGPTRSHDGTGLHKGTKTKKEESQMASSWKFMRPFKPSTIGLSMDLLFRSK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06963 560 MobiDBLite consensus disorder prediction 418 537 - -
Mepo3g06963 560 ProSiteProfiles Protein kinase domain profile. 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06963 560 PANTHER CELL DIVISION PROTEIN KINASE 95 385 - -
Mepo3g06963 560 MobiDBLite consensus disorder prediction 1 53 - -
Mepo3g06963 560 Gene3D Transferase(Phosphotransferase) domain 1 180 421 - -
Mepo3g06963 560 FunFam probable serine/threonine-protein kinase At1g54610 84 179 - -
Mepo3g06963 560 MobiDBLite consensus disorder prediction 489 513 - -
Mepo3g06963 560 FunFam probable serine/threonine-protein kinase At1g54610 180 421 - -
Mepo3g06963 560 MobiDBLite consensus disorder prediction 519 535 - -
Mepo3g06963 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mepo3g06963 560 SUPERFAMILY Protein kinase-like (PK-like) 91 386 IPR011009 -
Mepo3g06963 560 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Mepo3g06963 560 CDD STKc_CDK9_like 97 381 - -
Mepo3g06963 560 SMART serkin_6 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06963 560 Gene3D Phosphorylase Kinase; domain 1 84 179 - -
Mepo3g06963 560 Pfam Protein kinase domain 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06963 560 MobiDBLite consensus disorder prediction 426 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06963 Mepo-Chr3 83292721 83296914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06963 89 415 Core Cell Cycle Gene Families AT5G10270 51.714 7.96e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo3g06963 Pkinase 1.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06963 K08819 - gmx:100807756 988.793