Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06959 ATGAAGGAATCAACAACAACAGAAGCAGACCCTGTTAGCGTTTGCCTGAACCTCACCAATTCACTCATAGAACATGAAATCCCTACCGTCCATCACTTAAAAACCAAATGGTCAATCTTCGGAGTCAAACTAACCCAGCTCCAAACCCACCTCACCGATTTCTCCACCGAATATTCCAAATCCTCCACCACCAACCCACTCTCCCTCCACCTCCTCCACTCCATCCTCCAAACCCTCAATGACGCCGTTTCACTCTCTCACCACTGTCAATCCCAAATTTTACCCCACGGTAAACTCCAAACTCAAAGCCAAATCGATTCACTCATCGCCACTCTCCACCGCCACGTCACTGACTGTGATGTTCTCTTCCGTAGCGGACTTCTCCTCGAAACCCCCGCTTTCTCTAAACGCGAAGCTGTTCGATCTCTAACGAGAAATCTCATCGCACGGTTGCAAATCGGCTCACCAGAATCACGCGCCACTGCAATCGACTCACTCTTATCTCTTCTCAATGAAGATGATAAAAACGTTACAATAGCCGTCGCACAAGGTGTAGTTCCGGTGCTGGTTCGGTTACTCGATTCCAGCTCCGATATGAAGGAGAAAACTGTTGCTGCTATTTCCAGAGTTTCGACGGTGGAGAGTGGGAAGAATAATTTACTTGCGGAGGGGTTGTTGTTGTTGAATCATTTGGTTAGGGTTTTGGATTCCGGAAGTGGTTTAGCTATAGAGAAAGCTTGTATTGCGCTTCAGGCGTTGAGTTTGAGTAGAGATAATGCTAGAGCGATTGGATCTAGAGGTGGAATTTCGTCTCTGTTAGGGATTTGTCAAGGTGGAACGCCGGGTTCACAAGGTTATGCGGCTGCAGTTTTGAGGAATCTGGCCAAGTTTAATGAAATTAAAGAGAATTTTGTGGAGGAGAATGCTGTTGTTGTTTTGTTAGGCTTGGCTTCATCTGGAACGGGTTTGGCGCGAGAGAATGCGATTGGCTGTGTGGCCAATTTAATTTCAGAGGATGAGAGTATGAGGGTTTTGGCTGTGAAAGAAGGTGGTGTTGAGTGTTTGAAAAATTACTGGGATTCGGTTACGATGATTCAGAGTCTTGAAGTTGGGGTTGAAATGTTGAGGTATTTGGCTATGACTGGTCCAATTGATGAGGTTTTAGTTGGGGAAGGGTTTGTTGGGAGGGTGATTGGAGTGTTGAACTGTGATGTTTTAACGGTGAGGATTGCGGCTGCGAGAGCTGTTTATGCTATGGGATTGAATGGCGGAAACAAGACTAGAAAGGAAATGGGGGAATGTGGGTGTGTTCCTTTTTTGATTAAAATGTTGGATGGGAAAGGTGTGGAGGAGAAGGAATCTGCTGCAATGGCGTTGTCGGTTTTGTTGCAGCACCCTTTCAATAGGAGGGTTTTTCGGAAGGACGAGAGGGGAATAGTGAGTGCAGTTCATCTATTGAACCCTGCTTTGGTTAATTTGGATAAGAAATACCCTGTTTTGGTTCTGGTTTCACTTTTGCATTCGAAGACTTGTCGGAAACAAATGGTGGCTGCTGGGGCTTTCGTATATACGGAGAAGCTTGTTGAGTTGGATGTTCCGGGTTCAAAGAAATTGTTAGATGGACTTGGTCGTGGTACTCCATCATACATCATCTTTGGTGTTCCCGCGGTGCTCGTGCACTTTCACCTCCACTTGCAGCTTGATCCATTTGTGGTGAATTCACGGGCCAAAACATTCCCTGAGAACAAGTATGTCAAATGCTCTTCGGATGCAGATGTTGAAGGTGGAGGAGAATTCACCATCTCAAGTGTTGAAGACTTCATCAACTAG 1830 0.459 MKESTTTEADPVSVCLNLTNSLIEHEIPTVHHLKTKWSIFGVKLTQLQTHLTDFSTEYSKSSTTNPLSLHLLHSILQTLNDAVSLSHHCQSQILPHGKLQTQSQIDSLIATLHRHVTDCDVLFRSGLLLETPAFSKREAVRSLTRNLIARLQIGSPESRATAIDSLLSLLNEDDKNVTIAVAQGVVPVLVRLLDSSSDMKEKTVAAISRVSTVESGKNNLLAEGLLLLNHLVRVLDSGSGLAIEKACIALQALSLSRDNARAIGSRGGISSLLGICQGGTPGSQGYAAAVLRNLAKFNEIKENFVEENAVVVLLGLASSGTGLARENAIGCVANLISEDESMRVLAVKEGGVECLKNYWDSVTMIQSLEVGVEMLRYLAMTGPIDEVLVGEGFVGRVIGVLNCDVLTVRIAAARAVYAMGLNGGNKTRKEMGECGCVPFLIKMLDGKGVEEKESAAMALSVLLQHPFNRRVFRKDERGIVSAVHLLNPALVNLDKKYPVLVLVSLLHSKTCRKQMVAAGAFVYTEKLVELDVPGSKKLLDGLGRGTPSYIIFGVPAVLVHFHLHLQLDPFVVNSRAKTFPENKYVKCSSDADVEGGGEFTISSVEDFIN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06959 609 SUPERFAMILY ARM repeat 146 486 IPR016024 -
Mepo3g06959 609 Gene3D - 135 362 IPR011989 -
Mepo3g06959 609 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 544 - -
Mepo3g06959 609 Gene3D - 363 530 IPR011989 -
Mepo3g06959 609 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 184 225 IPR000225 GO:0005515
Mepo3g06959 609 SMART arm_5 297 337 IPR000225 GO:0005515
Mepo3g06959 609 SMART arm_5 173 212 IPR000225 GO:0005515
Mepo3g06959 609 SMART arm_5 256 296 IPR000225 GO:0005515
Mepo3g06959 609 SMART arm_5 424 464 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06959 Mepo-Chr3 83261485 83266652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06959 151 329 U-box Gene Family AT1G23030 28.571 8.41e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06959 - - gmx:100794077 742.651