Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06952 ATGTCAAAAGAGCAACAAATGACCTTGCAGGGTAAAGATCAATCTGATTCTGAGGGATCATCACCTCTCACTGTTACTTCCCGGGTTTTGTGTATGTTGGGAGACATCACTACTGGACCGGCTATTATGTTCACACAATGGCTTCAATCAGTTCGGAAACGAACTTCCAATCATCGATCTTCTGGATTCCCTCGCTCTTCTTCCACTCTTCCTTTTCGTCTTAGACAATCTGCCGAGGATGCAAAAATTGATCAGCTTCCCGAGCAAACTGAAATTAGTTTGTGGGATAGGCTTGGTAAAGCTGAAATGTTGGACATTGAATCAAGTTCATTTTCTTGGGACATGCTCTCTTCCCTTCACCACACTGAGCACGCCATCAGCAATGAACATTCTGAGGATGAAATCAATAGACCTCTTGAGGTAACTGTAAATTCTGGAGGGGTTGTCTTCTTTGCCATTTTCAATGTTCAGGGAAGTGACGATGCTTCTCCAAAAGAAGCAGCAGCTGTCATAAAGATATCGTCGTCAAGAATGGCAACACAGTCCGAACGCCTTGGATATGAATTCGCGAAGCGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTTGGAATGGCTCCAAATAAAGAAAGCTGCAGAAAAAGCAAGGGACTCAGCAAGTTCTGAGAGTGATCTAATCAGTGAAACGACATGTTCCGAACTTTTGGAAGCACTCGAGCTTAGTCGGTGCCTCTTGTTTTTGAGTTATGTACACGGTTCACCTTTGCTTGAAAGCTCTAGCGCATTTGAATCACAGGATTCCGCAGAAAGAATATCAGCAGCCCTTGGCAGGGTAATGATGTTAGATCTTGTTATCAGAAATGAAGACAGGCTTCCATGTCGTCAACTTAGGTGGCGTGGGAACCCTGCAAATTTGTTATTGGCCGAAAAGACAATCTCTTCAAATTTAGATACAATAGGAGATGCCTTTGATTTTGCAATGAACCGATATGGGTCCGGGATGATTGTGACACTTCAGAAAGAAAGAAGGTCAATTTCAATAGACAGCAGATCGAGTTCTCATAATCATGGAATAAGATCGCAAAGCTCTCGTCTTACACAGATAAGAGAATCATCTGATGACATGTGCCTTAAAAGTCAAACATCAGGAGATTCAATGTTTGCTGGCTCCAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCCCCAACTGGAAAACGTGCAGATGATCAGGTCAATTATCCTAAGTTGGTTGAGTTAGTACTAAATAGCTCTAAGTTTTCCTCTAACCTGTTACATGATATAACGGGAGGGAAATTAGGAAGTGCTGATGTACAAGGAAGTGACATAACATCAATAGTCCGTGAGTTCCGCAATGGTTTTCGTGCTGCTCTCATGGATCTGCAAGGATTCCATGTATTCCTACATTCATTGCACAAAAAACTTGATGACTTGTTGCGATCATTTAATAGTACTATAAGCAAAATTTCATCAGGGGAGTCTGAAAAAGAAGATTCACCTTCACCTGCTACTGGTAGTTGTCACTCTCCAACAAGTAAGGAGAAGTTTTCTAATGATAGCCATCGAGATTCTTGTGATTCAGATTCACAGAGATCTGTTCCAAGGGCTTCACCATCTTCAGGCAATAGAGATTTTTGTGACTCTGCTTCTCCTATGTCAAGAGAAGGTTGTCATGGAAAATCCTCTAAAGGAAGTGTGGAGCCTTTGCTTGGTTCCCGCTTTACAGCTAAGCTCCGTGACTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACATTGGAATGAAATGCTTAAAAATGATGCTATCAAGTTATGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGTAGTGATAGCAACACCGTTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAAAGGATTGCGTTGATATCTGAGGTTGAAAACACAGAGAGACCATCTGCTGTTACAAATAATTTGTTCATTGGTGGAGCACAATGTGCTCGATCTGTACACACAATGCAACACTTGGGAATCACTCATATTTTGTGTTTGTGTGCTAACGAAATTGGACAATCAGATTCTCAATTTCCTGATCTATTTACTTACAAAAACTTCTCTGTGTGTGACACTGAGAATTCTGACATCAGCATCCTATTTGATGAAGCTTGTGATTTTATAGAAGATGTTGAGAGAGCAGGTCAGAGAGTTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGTGTCACTGTACTCCTTGCTTACTTGATGCTCAGAAAGAATTTCACTTTATCGGTAGCATGGAATGCTATGAGAAAAGCCCACAGCCGAGCGCAGCCTAATGATGGTTTTGCAAAGATCTTACAAGGACTTGATAAAAAACTGCATGGGAAGGTTTCAATGGAGTGGCAGCGGCGGAAACCAACAATGAAAACTTGTCCTATATGTGGCAAGAATGCTGGACTGAGCAGCGGCTCGCTTAAGATCCATCTTCAGAAGTCACATAAAAGGCTATCATCAGGGAGTGTTGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCAATTTGAATATTAGCCGTGGTGGGAGAGTCAGCCCCACTCAAAGGCAATCTCATTCAATGACAGATTAA 2688 0.417 MSKEQQMTLQGKDQSDSEGSSPLTVTSRVLCMLGDITTGPAIMFTQWLQSVRKRTSNHRSSGFPRSSSTLPFRLRQSAEDAKIDQLPEQTEISLWDRLGKAEMLDIESSSFSWDMLSSLHHTEHAISNEHSEDEINRPLEVTVNSGGVVFFAIFNVQGSDDASPKEAAAVIKISSSRMATQSERLGYEFAKRLGVQTPQARVIHNTSLEWLQIKKAAEKARDSASSESDLISETTCSELLEALELSRCLLFLSYVHGSPLLESSSAFESQDSAERISAALGRVMMLDLVIRNEDRLPCRQLRWRGNPANLLLAEKTISSNLDTIGDAFDFAMNRYGSGMIVTLQKERRSISIDSRSSSHNHGIRSQSSRLTQIRESSDDMCLKSQTSGDSMFAGSNIVAIDSGVPRRPPTGKRADDQVNYPKLVELVLNSSKFSSNLLHDITGGKLGSADVQGSDITSIVREFRNGFRAALMDLQGFHVFLHSLHKKLDDLLRSFNSTISKISSGESEKEDSPSPATGSCHSPTSKEKFSNDSHRDSCDSDSQRSVPRASPSSGNRDFCDSASPMSREGCHGKSSKGSVEPLLGSRFTAKLRDFHKFAKVDAESYKELEHWNEMLKNDAIKLCQENNFNSGFFEGSDSNTVVDAYELKVRLEHILERIALISEVENTERPSAVTNNLFIGGAQCARSVHTMQHLGITHILCLCANEIGQSDSQFPDLFTYKNFSVCDTENSDISILFDEACDFIEDVERAGQRVLVHCFEGRSRSVTVLLAYLMLRKNFTLSVAWNAMRKAHSRAQPNDGFAKILQGLDKKLHGKVSMEWQRRKPTMKTCPICGKNAGLSSGSLKIHLQKSHKRLSSGSVDSAMTMEIQKALTNLNISRGGRVSPTQRQSHSMTD 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06952 895 FunFam Dual specificity protein phosphatase PHS1 641 815 - -
Mepo3g06952 895 SUPERFAMILY Protein kinase-like (PK-like) 46 417 IPR011009 -
Mepo3g06952 895 Pfam Actin-fragmin kinase, catalytic 91 330 IPR015275 -
Mepo3g06952 895 MobiDBLite consensus disorder prediction 355 371 - -
Mepo3g06952 895 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g06952 895 SMART dsp_5 669 811 IPR020422 GO:0006470|GO:0008138
Mepo3g06952 895 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 669 814 IPR029021 -
Mepo3g06952 895 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 11 894 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mepo3g06952 895 MobiDBLite consensus disorder prediction 543 560 - -
Mepo3g06952 895 CDD DSP 670 806 - -
Mepo3g06952 895 MobiDBLite consensus disorder prediction 876 895 - -
Mepo3g06952 895 MobiDBLite consensus disorder prediction 351 371 - -
Mepo3g06952 895 Gene3D - 259 504 IPR036940 -
Mepo3g06952 895 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 738 790 IPR000387 GO:0016311|GO:0016791
Mepo3g06952 895 Gene3D Protein tyrosine phosphatase superfamily 652 824 IPR029021 -
Mepo3g06952 895 MobiDBLite consensus disorder prediction 502 578 - -
Mepo3g06952 895 Pfam Dual specificity phosphatase, catalytic domain 677 805 IPR000340 GO:0008138|GO:0016311
Mepo3g06952 895 MobiDBLite consensus disorder prediction 527 542 - -
Mepo3g06952 895 ProSiteProfiles Dual specificity protein phosphatase domain profile. 669 814 IPR020422 GO:0006470|GO:0008138
Mepo3g06952 895 MobiDBLite consensus disorder prediction 502 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06952 Mepo-Chr3 83168123 83173522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06952 18 880 Protein tyrosine phosphatase (PTP) family AT5G23720 61.080 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06952 K14165 - gmx:102661225 1225.69