Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06943 ATGGATAGAAGGAGAGAATCATGGGAGGAAGAGGGAAGAGAAGATGAGAATTTGTTTCCAGTGTTTTCTGAAAGGTCCCAACAAGATATGTCTGCCATAGTATCTGCTCTTACACAAGTCATGGGCGGCAACAACAACAATGAAATGCATGAAGCTTCTTCAATCCATAATATCGAACAATCTCAGCCACCACAGCAAGATCAAGGGAATGTAAGAAAAAGACACTATAGAGGTGTGAGGCAGAGGCCATGGGGAAAGTGGGCTGCAGAGATCCGCGACCCGAAGAAGGCAGCAAGGGTATGGCTAGGAACATTTGAAACGGCTGAGGCTGCTGCCGTTGCATACGATGAAGCTGCACTCAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTTCCTGAAAGGGTTCAAAGTACAGCAGAATTTGGATATAACCAACAATTTCATCACCAAGTGTCCACTACAAGTAACGAGCAACAATCCAATCCAGTTCCTCTTCCACACTTTTCTCAAGAAACATATTCAAATCCTTATCAATATGCTGCACAAGCACATCTTCAAGCTAGTGGAAGTAGCAACTTCAATCAGGATATGCTTCGTTTCTATGGGAGAGACATGTTTGTTTCTGATTCTCAACCTTTATCAACAGCATCTCCGTCTTCATCCTCATCTTCAGGACTATCTCAGCAGCAGCAACAAGAGCTTCTGAGATTGTCAATGCAATATGGAGGTTCTTCTTCCTCTTCTGATCCTCCAATGAATTGGAGGGATGACATGGATAGAAGACAATGA 789 0.4322 MDRRRESWEEEGREDENLFPVFSERSQQDMSAIVSALTQVMGGNNNNEMHEASSIHNIEQSQPPQQDQGNVRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAVAYDEAALRFKGSKAKLNFPERVQSTAEFGYNQQFHHQVSTTSNEQQSNPVPLPHFSQETYSNPYQYAAQAHLQASGSSNFNQDMLRFYGRDMFVSDSQPLSTASPSSSSSSGLSQQQQQELLRLSMQYGGSSSSSDPPMNWRDDMDRRQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06943 262 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Mepo3g06943 262 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Mepo3g06943 262 PANTHER DNA-BINDING DOMAIN 46 217 IPR044808 GO:0003700|GO:0009873
Mepo3g06943 262 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Mepo3g06943 262 MobiDBLite consensus disorder prediction 1 20 - -
Mepo3g06943 262 MobiDBLite consensus disorder prediction 41 77 - -
Mepo3g06943 262 MobiDBLite consensus disorder prediction 41 69 - -
Mepo3g06943 262 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Mepo3g06943 262 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g06943 262 MobiDBLite consensus disorder prediction 149 171 - -
Mepo3g06943 262 MobiDBLite consensus disorder prediction 210 252 - -
Mepo3g06943 262 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Mepo3g06943 262 MobiDBLite consensus disorder prediction 210 262 - -
Mepo3g06943 262 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Mepo3g06943 262 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Mepo3g06943 262 FunFam Ethylene-responsive transcription factor 2 74 133 - -
Mepo3g06943 262 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06943 Mepo-Chr3 83077093 83078993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06943 17 170 AP2-EREBP Transcription Factor Family AT5G61890 58.182 6.26e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g06943 AP2 4.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06943 - - gmx:100787091 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06943 3 83077093 83078993 Mepo3g06943 3 83077093 83078993 ECH