Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06942 ATGGATCCCGATGCATTCACCGCCAGCCTATTCAAGTGGGACCCACGCACCGTCCTACCAACAGCTCCACCTCTCCGTCCCCAACTTCTCGACTACGCAGTCACTCCTTCAACTGCTCCATCACCTTATTACCCAGCGAGATTACCAAGAGAGCTTGGAGGGTTGGAGGAACTTTTCCAAGCTTATGGAATCAGATACTACACGGCGGCAAAGATAGCAGAGCTTGGTTTCACGGTGAGCACGCTGGTGGACATGAAGGATGATGAGCTTGATGACATGATGAACAGCCTCTCCCAGATTTTTCGATGGGATCTTCTTGTTGGGGAAAGATACGGAATCAAAGCTGCCATTAGAGCTGAACGGAGACGCCTTGATGAAGAGGAAATTAAACGCCGGGGTCTTCTTTCCGGCGATACCACTAATGCTCTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAGCGAGAGAAGGAGGCGGTGGGAAGCGGAGGAGGGAGTACTTGGGAGGTAGCTGTGGTGGAGGAGAGGAGAAAGAGGCAGCAAATAAGGAGGAGAAGGATGAAGATGAAGGGGAATTGTGATCATGGTGAGAATGAAGAAGGAGAAGAGGAGGAAGAAGATAACATCAGTGGTGGGGGTGAGAGACAAAGAGAACATCCATTCATTGTGACAGAGCCTGGGGAAGTTGCACGTGGCAAAAAGAACGGTCTGGATTATCTGTTTCATCTCTATGAACAATGTCGTGAGTTCTTGATTCAGGTTCAAGCCATTGCTAAGGAACGCGGTGAGAAATGCCCTACCAAGGTGACAAATCAGGTATTTAGGTACGCAAAGAAAGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTACGTGCACTGTTATGCATTGCATTGTTTAGATGAAGAGGTATCAAATGAGCTGAGAAGAGGGTTTAAGGAAAGAGGAGAGAACGTTGGTGCATGGAGACAAGCTTGTTACAAGCCACTTGTAGCAATAGCTGCACGTCAAGGATGGGATATTGATGCAATATTCAACGCACATCCTCGTCTTTCAATATGGTACGTTCCAACAAAACTTCGTCAGCTTTGTCATGCTGAAAGGAACAGTGCTGCTGCTTCAAGCTCTGTTTCTGTTGGAACTACGCACCTTCCCTTCTAA 1179 0.4809 MDPDAFTASLFKWDPRTVLPTAPPLRPQLLDYAVTPSTAPSPYYPARLPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERRRLDEEEIKRRGLLSGDTTNALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVAVVEERRKRQQIRRRRMKMKGNCDHGENEEGEEEEEDNISGGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSVGTTHLPF 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06942 392 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 214 378 IPR035209 GO:0003677
Mepo3g06942 392 Pfam Floricaula / Leafy protein SAM domain 51 128 IPR035079 -
Mepo3g06942 392 MobiDBLite consensus disorder prediction 185 222 - -
Mepo3g06942 392 Gene3D Protein LEAFY 215 384 IPR038276 -
Mepo3g06942 392 PANTHER PROTEIN LEAFY 1 391 IPR002910 GO:0003677|GO:0006355
Mepo3g06942 392 MobiDBLite consensus disorder prediction 147 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06942 1 386 Orphan Transcription Factor Family AT5G61850 64.706 9.24e-158 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Mepo3g06942 C_LFY_FLO 1.6e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06942 - - gmx:100798196 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06942 3 83062997 83064880 Mepo3g06942 3 83062997 83064880 ECH