Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06909 ATGTCGAAATCAAACATCCCAAACAATACAACACTAACACCACCGAAAACCTCATGGGTTCTCCCTTATGTAACAGAAAATCTTCGTGAAGTTTACACCTTAGGTAGAAAACTGGGTCAAGGTCAGTTCGGGATCACATATCATTGCACACACAACTCAACGGGTAGAACCTACGCTTGCAAATCAATCTCAAAGAAGAAGCTTTTATGCAAAGAGGATTACGATGATGTTTGGAGAGAGATTCAGATAATGCACCATTTATCTGAACATCCAAATGTTGTGATGATCCATGAAACATATGAGGATTCATTTTTTGTTCATTTGGTTATGGAGCTTTGTGAAGGCGGGGAATTGTTTGATAGGATTGTGCAAAAGGGTCATTATAGTGAGAGACAAGCTGCTAAGTTGATTAAGACTATTGTTGAGGTTGTTGAAGCTTGTCATTCTCTTGGAGTTATGCACAGAGACCTTAAACCTGAGAATTTTATGTTTGATTCTGTTGATGAAGATGCTGTTCTCAAATCTATTGATTTTGGGCTGTCTGTTTTTTACAAGCCAGGTGAAATCTTTTGTGATATTTCTGGAAGCCCATACTATGTTGCACCAGAGGTCTTGCACAAAAAGTATGGATCTGAAGCCGACGTGTGGAGTGCTGGTGTTATTCTGTACATCTTGTTAAGCGGGCGGTTTCCGTTTTGTGCTGACACCGAAAAGGGGATCTTCCGACAGATTTGCCGTGGAAGACTTAATTTCCAGTCTGAGCCATGGCCTCAGATTTCAGACAGTGCCAAGGATCTAATTCGAAAGATGCTTGATAGGAATCCAAGAACAAGGTTTACAGCTCACCAAGTGCTATGTCACCCATGGATTGTCGATGATAACATTGCACCAGATAAACCTCTTGATTCTGCTGTTTTATCTTGTCTGAAGCAATTCTCTGCAATGAATAAACTGAAAAAGATGGCTTTACATGTTATTGCCAAGAGGCTTAACGAAGAAGAAATCGGTGGTCTGAAAGAATTATTTAGGATGCTTGACACTGACAATAGTGGAACCATAACATTGGATGAGCTAAAAGAAGGCCTACAGCAAGTAGGATCGGAACTTATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCAGATATTGATAATAACGGGACACTCGACTATGGTGAATTCATTGCTGCTACTGTCCACTTAAATAAGCTGGAGCAAGAGGAAAATCTATTGTCAGCATTCTTGTACTTTGACAAAGATGGAAGTGGTTACATAACCATTGACGAGATACAAGCAGCTTGTAAAGAGTTTGGTTTGGATGATGTTCATATTGATGAAATGGTCAAGGAAATTGATCAAGATAATGATGGACAAATAGACTATGGAGAGTTTGCTGCCATGATGAGAAAGGGCAATGGAGGGATCGGAAGGCGAACCATGACAAGCACACTCAATTTCAGGGATGCTCTAGGAATCATAGGCAATGGGTCCAATTAA 1497 0.4028 MSKSNIPNNTTLTPPKTSWVLPYVTENLREVYTLGRKLGQGQFGITYHCTHNSTGRTYACKSISKKKLLCKEDYDDVWREIQIMHHLSEHPNVVMIHETYEDSFFVHLVMELCEGGELFDRIVQKGHYSERQAAKLIKTIVEVVEACHSLGVMHRDLKPENFMFDSVDEDAVLKSIDFGLSVFYKPGEIFCDISGSPYYVAPEVLHKKYGSEADVWSAGVILYILLSGRFPFCADTEKGIFRQICRGRLNFQSEPWPQISDSAKDLIRKMLDRNPRTRFTAHQVLCHPWIVDDNIAPDKPLDSAVLSCLKQFSAMNKLKKMALHVIAKRLNEEEIGGLKELFRMLDTDNSGTITLDELKEGLQQVGSELMESEIKDLMDAADIDNNGTLDYGEFIAATVHLNKLEQEENLLSAFLYFDKDGSGYITIDEIQAACKEFGLDDVHIDEMVKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMTSTLNFRDALGIIGNGSN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06909 498 Gene3D - 331 402 - -
Mepo3g06909 498 ProSitePatterns EF-hand calcium-binding domain. 346 358 IPR018247 -
Mepo3g06909 498 Gene3D Transferase(Phosphotransferase) domain 1 119 330 - -
Mepo3g06909 498 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 464 - -
Mepo3g06909 498 Gene3D - 403 497 - -
Mepo3g06909 498 Coils Coil 355 375 - -
Mepo3g06909 498 ProSiteProfiles Protein kinase domain profile. 32 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06909 498 FunFam calcium-dependent protein kinase SK5 327 399 - -
Mepo3g06909 498 Gene3D Phosphorylase Kinase; domain 1 34 118 - -
Mepo3g06909 498 CDD STKc_CAMK 31 289 - -
Mepo3g06909 498 ProSiteProfiles EF-hand calcium-binding domain profile. 333 368 IPR002048 GO:0005509
Mepo3g06909 498 ProSitePatterns EF-hand calcium-binding domain. 418 430 IPR018247 -
Mepo3g06909 498 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
Mepo3g06909 498 ProSiteProfiles EF-hand calcium-binding domain profile. 443 474 IPR002048 GO:0005509
Mepo3g06909 498 SMART serkin_6 32 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06909 498 CDD EFh 338 397 IPR002048 GO:0005509
Mepo3g06909 498 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Mepo3g06909 498 Pfam EF-hand domain pair 408 469 IPR002048 GO:0005509
Mepo3g06909 498 Pfam EF-hand domain pair 338 398 IPR002048 GO:0005509
Mepo3g06909 498 SUPERFAMILY Protein kinase-like (PK-like) 32 302 IPR011009 -
Mepo3g06909 498 FunFam Calcium-dependent protein kinase SK5 403 498 - -
Mepo3g06909 498 SMART efh_1 373 401 IPR002048 GO:0005509
Mepo3g06909 498 SMART efh_1 443 471 IPR002048 GO:0005509
Mepo3g06909 498 SMART efh_1 337 365 IPR002048 GO:0005509
Mepo3g06909 498 SMART efh_1 409 437 IPR002048 GO:0005509
Mepo3g06909 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Mepo3g06909 498 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Mepo3g06909 498 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Mepo3g06909 498 Pfam Protein kinase domain 32 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06909 498 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Mepo3g06909 498 SUPERFAMILY EF-hand 329 469 IPR011992 -
Mepo3g06909 498 FunFam Calcium-dependent protein kinase 1 34 117 - -
Mepo3g06909 498 FunFam Calcium-dependent protein kinase SK5 118 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06909 Mepo-Chr3 82795497 82799354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06909 20 498 EF-hand Containing Proteins AT1G35670 73.237 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo3g06909 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06909 K13412 - gmx:100790443 854.358