Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06892 ATGGCCACGGAACTTTGTGGCGGGTCTCTATTCTTATCCGTTAAAACTCAACGGTTACTCCATCATTCTCAACGAACACCAATAACCGCTACTAGATTCTTCAATTCCTCATCCAAACTTCGCTTCACCTTTCCCCGCCGCAACTCCTCCATCTTCTGCCGCGTTGCCAGCACCGACACCGTCTCTAACTTCGACTCCGCCGCTAAAGATGGACAGGACCGTCTCTCTAAGGTGCCGGTGTCGAGTATACGGAACTTCTCAATCATTGCTCATATTGACCATGGGAAGTCCACGTTAGCGGATAAGTTGCTTCAGGTTACTGGTACTGTTCCTCAGCGAGAAATGAAGGAACAGTTTCTTGATAATATGGATTTAGAGAGAGAAAGAGGCATCACTATTAAGCTTCAGGCCGCTCGAATGCGTTATGTGTTTGAAAATGAACCATATTGCTTAAATTTGATAGATACTCCTGGACACGTCGACTTCTCCTACGAGGTTTCTCGATCACTCGCTGCGTGTGAGGGTGCTCTCCTTGTAGTAGATGCTTCTCAGGGGGTTGAAGCGCAAACACTAGCTAATGTTTATTTAGCTTTGGATAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTTCCGGGTGCAGAACCAGATCGAGTTCTCAAGGAGATTGAAGAGGTTATAGGTCTAGATTGTAGCAACGCCATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATGGACATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGCTGATACATCAAAGAAGCCACTGAGGGCTTTAATATTTGATAGTGCAGTTACTACGATCCATATAGAGGTGTTATTGTATACTTCCGAGTTGTAG 879 0.446 MATELCGGSLFLSVKTQRLLHHSQRTPITATRFFNSSSKLRFTFPRRNSSIFCRVASTDTVSNFDSAAKDGQDRLSKVPVSSIRNFSIIAHIDHGKSTLADKLLQVTGTVPQREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGAEPDRVLKEIEEVIGLDCSNAILCSAKEGIGIMDILNAIVARIPPPADTSKKPLRALIFDSAVTTIHIEVLLYTSEL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06892 292 Gene3D - 81 263 IPR027417 -
Mepo3g06892 292 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 81 262 IPR000795 GO:0003924|GO:0005525
Mepo3g06892 292 FunFam Elongation factor 4 80 263 - -
Mepo3g06892 292 PANTHER TRANSLATION FACTOR GUF1-RELATED 61 278 IPR006297 GO:0005525
Mepo3g06892 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 277 IPR027417 -
Mepo3g06892 292 NCBIfam small GTP-binding protein domain 84 253 IPR005225 GO:0005525
Mepo3g06892 292 CDD LepA 84 261 - -
Mepo3g06892 292 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 121 136 IPR031157 -
Mepo3g06892 292 PRINTS GTP-binding elongation factor signature 204 213 IPR000795 GO:0003924|GO:0005525
Mepo3g06892 292 PRINTS GTP-binding elongation factor signature 168 179 IPR000795 GO:0003924|GO:0005525
Mepo3g06892 292 PRINTS GTP-binding elongation factor signature 152 162 IPR000795 GO:0003924|GO:0005525
Mepo3g06892 292 PRINTS GTP-binding elongation factor signature 85 98 IPR000795 GO:0003924|GO:0005525
Mepo3g06892 292 PRINTS GTP-binding elongation factor signature 128 136 IPR000795 GO:0003924|GO:0005525
Mepo3g06892 292 Pfam Elongation factor Tu GTP binding domain 82 259 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06892 Mepo-Chr3 82622710 82627286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06892 83 212 Eukaryotic Initiation Factors Gene Family AT3G22980 44.361 1.33e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06892 K21594 - gmx:100784073 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06892 3 82622710 82627286 Mepo3g06892 3 82622710 82627286 ECH