Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo3g06892 | ATGGCCACGGAACTTTGTGGCGGGTCTCTATTCTTATCCGTTAAAACTCAACGGTTACTCCATCATTCTCAACGAACACCAATAACCGCTACTAGATTCTTCAATTCCTCATCCAAACTTCGCTTCACCTTTCCCCGCCGCAACTCCTCCATCTTCTGCCGCGTTGCCAGCACCGACACCGTCTCTAACTTCGACTCCGCCGCTAAAGATGGACAGGACCGTCTCTCTAAGGTGCCGGTGTCGAGTATACGGAACTTCTCAATCATTGCTCATATTGACCATGGGAAGTCCACGTTAGCGGATAAGTTGCTTCAGGTTACTGGTACTGTTCCTCAGCGAGAAATGAAGGAACAGTTTCTTGATAATATGGATTTAGAGAGAGAAAGAGGCATCACTATTAAGCTTCAGGCCGCTCGAATGCGTTATGTGTTTGAAAATGAACCATATTGCTTAAATTTGATAGATACTCCTGGACACGTCGACTTCTCCTACGAGGTTTCTCGATCACTCGCTGCGTGTGAGGGTGCTCTCCTTGTAGTAGATGCTTCTCAGGGGGTTGAAGCGCAAACACTAGCTAATGTTTATTTAGCTTTGGATAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTTCCGGGTGCAGAACCAGATCGAGTTCTCAAGGAGATTGAAGAGGTTATAGGTCTAGATTGTAGCAACGCCATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATGGACATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGCTGATACATCAAAGAAGCCACTGAGGGCTTTAATATTTGATAGTGCAGTTACTACGATCCATATAGAGGTGTTATTGTATACTTCCGAGTTGTAG | 879 | 0.446 | MATELCGGSLFLSVKTQRLLHHSQRTPITATRFFNSSSKLRFTFPRRNSSIFCRVASTDTVSNFDSAAKDGQDRLSKVPVSSIRNFSIIAHIDHGKSTLADKLLQVTGTVPQREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGAEPDRVLKEIEEVIGLDCSNAILCSAKEGIGIMDILNAIVARIPPPADTSKKPLRALIFDSAVTTIHIEVLLYTSEL | 292 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo3g06892 | 292 | Gene3D | - | 81 | 263 | IPR027417 | - | |
Mepo3g06892 | 292 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 81 | 262 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo3g06892 | 292 | FunFam | Elongation factor 4 | 80 | 263 | - | - | |
Mepo3g06892 | 292 | PANTHER | TRANSLATION FACTOR GUF1-RELATED | 61 | 278 | IPR006297 | GO:0005525 | |
Mepo3g06892 | 292 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 79 | 277 | IPR027417 | - | |
Mepo3g06892 | 292 | NCBIfam | small GTP-binding protein domain | 84 | 253 | IPR005225 | GO:0005525 | |
Mepo3g06892 | 292 | CDD | LepA | 84 | 261 | - | - | |
Mepo3g06892 | 292 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 121 | 136 | IPR031157 | - | |
Mepo3g06892 | 292 | PRINTS | GTP-binding elongation factor signature | 204 | 213 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo3g06892 | 292 | PRINTS | GTP-binding elongation factor signature | 168 | 179 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo3g06892 | 292 | PRINTS | GTP-binding elongation factor signature | 152 | 162 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo3g06892 | 292 | PRINTS | GTP-binding elongation factor signature | 85 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo3g06892 | 292 | PRINTS | GTP-binding elongation factor signature | 128 | 136 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo3g06892 | 292 | Pfam | Elongation factor Tu GTP binding domain | 82 | 259 | IPR000795 | GO:0003924|GO:0005525 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo3g06892 | Mepo-Chr3 | 82622710 | 82627286 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo3g06892 | 83 | 212 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 44.361 | 1.33e-25 | 104 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo3g06892 | K21594 | - | gmx:100784073 | 428.328 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo3g06892 | 3 | 82622710 | 82627286 | Mepo3g06892 | 3 | 82622710 | 82627286 | ECH |