Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06871 ATGCAAGGTGAATTAGAATTGCCACCTGGTTTCAGATTTCACCCCACTGATGAAGAATTGGTGAATCATTACTTGTGTCGCAAATGTGCTGGTCAATCAATTTCTGTTCCGGTTGTCAAAGAAGTTGATTTGTATAAGTTTGATCCATGGCAGCTTCCAGAAATGGGTTACCATAGTGAGAAAGAATGGTATTTTTTCTCTCCAAGGGACAGAAAGTATCCTAATGGTTCGCGACCAAATCGAGCTGCTGGAAGTGGTTATTGGAAAGCTACTGGAGCTGATAAACCAATTGGGAAATTGAAGCCGATGGGGATTAAAAAGGCGCTAGTATTCTATGCTGGTAAAGCCCCCAAAGGAGTTAAAACTAATTGGATTATGCACGAATATCGTCTTGCCAACGTTGATAGATCAGCCGGAAAGAAAAATAACTTGAGGCTTGATGATTGGGTGTTGTGTAGAATTTACAACAAGAAAGGCAAGATTGAGAAATTCAACACTAGTACCACACCAAAGGTTCAAAATTATTATGAACACGAAGAAGTAGAAGAACATGAGATGAAGCCAGAAATTCAAAAGTTGGGGAATTACCAATTGTACATGGACACTTCAGATTCAGTTCCAAAGCTGCACACGGACTCTAGCAGCTCCGGTGGACACGTGGTTTCACCGGATGTCACGTGCGACAGGGAGGTGCAGAGTGAACCTAAGTGGAATGATCTTGGGATACAGCTGGATGACGCGTTTGATTTTCAGCTCAATTACTTGGAAAATGCTCTTTCATTTGATATTGATGATGACCCCTTTGGGACCAATCAGTACCAAATCAACCAGCTTTCGCCGTTACAGGACATATTCATGTACCCACAAAAGCCATTTTGA 879 0.4175 MQGELELPPGFRFHPTDEELVNHYLCRKCAGQSISVPVVKEVDLYKFDPWQLPEMGYHSEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKLKPMGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIEKFNTSTTPKVQNYYEHEEVEEHEMKPEIQKLGNYQLYMDTSDSVPKLHTDSSSSGGHVVSPDVTCDREVQSEPKWNDLGIQLDDAFDFQLNYLENALSFDIDDDPFGTNQYQINQLSPLQDIFMYPQKPF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06871 292 PANTHER NAC TRANSCRIPTION FACTOR 56 7 200 - -
Mepo3g06871 292 FunFam NAC transcription factor 16 161 - -
Mepo3g06871 292 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Mepo3g06871 292 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mepo3g06871 292 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Mepo3g06871 292 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06871 Mepo-Chr3 82416896 82418595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06871 1 292 NAC Transcription Factor Family AT1G01720 62.667 1.80e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g06871 NAM 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06871 - - gmx:100779770 474.937