Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06856 ATGTTTCGCTTTCGCTCTTCAAATTTTGCTTCCGTGTATTCAATTCCACTAACTTCTCTCACATCACGTTACAGTTTCCACACACCGCGAGTGAAATCAACGCTCACAATTCTCGAGAAAATGTCTGGAACTGGAAAGGGGAAGAAGAGGGAAGAACTCGACCACGCTTCCGAGGACGATACTGAATCTCACGCGCCTCCCAAGAAGACCGCCAAGAAAGACACCGAAGATGACTCTGGTGACATCGTCTTTGAGATTGGGAAGAACAGGAGGGTTTCCATCAGGACCTGGAATAAACAGCTTTGGGTCGACATTCGTGAATTTTACACCAAAGATGGCAAGCAGTTGCCTGGCAAAAAAGGTATCTCATTGAACATGGAACAGTGGATTGTGCTTCGTGATCACATTGAAGAAATCGACAATGCAGTCAAAGAGAAATCTTAG 444 0.4527 MFRFRSSNFASVYSIPLTSLTSRYSFHTPRVKSTLTILEKMSGTGKGKKREELDHASEDDTESHAPPKKTAKKDTEDDSGDIVFEIGKNRRVSIRTWNKQLWVDIREFYTKDGKQLPGKKGISLNMEQWIVLRDHIEEIDNAVKEKS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06856 147 MobiDBLite consensus disorder prediction 43 80 - -
Mepo3g06856 147 Pfam Transcriptional Coactivator p15 (PC4) 84 135 IPR003173 GO:0003677|GO:0006355
Mepo3g06856 147 SUPERFAMILY ssDNA-binding transcriptional regulator domain 83 145 IPR009044 GO:0003677|GO:0006355
Mepo3g06856 147 Gene3D Transcriptional Coactivator Pc4; Chain A 73 147 IPR009044 GO:0003677|GO:0006355
Mepo3g06856 147 FunFam Putative transcriptional co-activator 73 147 - -
Mepo3g06856 147 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 46 146 IPR045125 GO:0003713|GO:0060261
Mepo3g06856 147 MobiDBLite consensus disorder prediction 37 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06856 Mepo-Chr3 82304929 82307266 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Mepo3g06856 PC4 2e-22 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06856 K25815 - thj:104818417 137.117