Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06849 ATGAAGTTAATCGGCGACGGAGACGGTGGCCGGAAAGTGTTGGTCGGAGTTAAATTAGATCCCCGGAGCCGTGAATTGCTCACGTGGGCTCTCGTTAAGGTTGCTGAGCCTGGTGACCTTGTTATCGCTCTTCACGTTCTCGACACCGTAACTGAGGGAACATCGTCGTTGTTATCGTTGGTGAAGACTTTGGATTCGGTTCTCGCAGTTTACGAAGGATTCTGCAATTTAAAACAGGTTGATCTTAAATTGAAAGTGTGTAGAGGTGATTCGGTTCGGAAGCTTCTAGTGCAAGAGGCCAAAGCGTTAGGAGTTTCAACGGTTATTTTAGGAACTTCCAAATCTCATCATACTATTCGTTCTTCTGCGTGGGTTGCTAAGTATTGCGCGAAGAAATTGCATAAATGTGTTTCTGTTTTCGCTGTTGATAATGGCAAAATTGCTTTCCAAAGAGAAGCTACTGCTCAAGAAAAATTACAGTGGTCCTATTTGATTTTTACGAATAAAAGTGTGAAGGATTGTGGAAGTTGTGCTCTGCGCGAGATTTCTGAAACTGAATTTAATCAAGGAGAGTTGCTTGATTATTGTGAAACAGAAAATCCTCTTGCTTTGGTACCGTTTCAAAAACATGACGATGAATCCATGGTGGGTGATGAATCCGTAGTAGGTGATTCGAAACGGATGAAACCTGGTTGGTCACTCATTCGCAATGTATTTCATTCCAAAAGGCATACCACCAAGTCTTCGCCGAAAAGTACATTTGTTTTTCAACGGGGAGTACGACATTCCACCAGTCTTTCTTCATCTGTAGTCTATCCAGATCATAAACAAATTAATACTGATCCAATTGATGATTCTGCCCTGGACGGGGAGAGTGGCGCCATTGTGCCATACGGATCTGCTATTATATTACCTCCTCCCACCCTTTGTGGTGATGCCGGTAGCCTTCCCGAAGAATTGTTGATCTTACGAGATAAGTACTCGTCTTCCTGTAGACTGTATAGTTTGCAGGAACTTGTAGCTGCTACTGTAAACTTCTCATCTGAAAATTTGGTTGGCAAAGGTGGTAGTAGTGTTGTTTACCGAGGATGTCTTTCCGATGGCAAAGAATTGGCGGTGAAAATTTTGAAGCCATCAGAGAATGTTTTAAAAGAGTTTGCTCAGGAAGTTGAGATTGTTACAACTTTGAATCACAATAACATAATATCTCTATCTGGTTTTTGTTTAGAGGGAAACCATTTATTACTGGTATATGATTTTTTATCAAGAGGAAGCCTAGAAGAAAACCTTCATGGTAATAAAAAGGACGATAATTCATTTGGCTGGCAAGAGAGGTACCGGGTGGCCGTGGCTGTAGCTGAGGCCTTGGATTATCTGCACAACGGATGTGCACGAGCTGTAATCCACAGGGATGTCAAATCATCTAATATCCTTCTTTCAGATGATTTTGAGGCTCAGCTCTCAGACTTTGGACTGGCTAGTTGGGGTTCTTCTTCTTCCCAAATTATTTGTACGGATGTTGCCGGAACTTTTGGATACCTGGCTCCTGAATATTTCATGCACGGTAGAGTAACCGACAAAATTGATGTATATGCTTTTGGGGTTGTACTCCTTGAGCTTCTATCCAATAGGAAGCCCATTAACAACGAACGCCCAAAGGGTCACGAGAGCCTTGTTATGTGGGCTACATCAATCTTGAAAAGTGGAAAGATTTCCCAGTTGCTTGACCCAAGCCTTGGAAGTGAGTACAACAATTGCCAGATCAAGAGAATGGTTTTGGCTGCTACTCTCTGTATTAGACGGGTTCCTCGTCTGCGACCTCAAATCGGAGTTATACTGAAACTTCTTCACGGTGATGAAGAAGTAACAAGATGGGCAGAACAAGAAGTTTGTGCACCAGAAACACATGATGGATTTGATGAGGAACTATTTCCAACAAATATTCAGTCCCACCTTAACCTTGCACTACTGGACTTGGAGGATGATGCAGTTTCTATCACTAGCACTGAGCAGTGTGTCTCATTGGAAGACTATTTGCGAGGAAGATGGAGTCGCAGTTCAAGTTTTGACTAA 2073 0.4255 MKLIGDGDGGRKVLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDTVTEGTSSLLSLVKTLDSVLAVYEGFCNLKQVDLKLKVCRGDSVRKLLVQEAKALGVSTVILGTSKSHHTIRSSAWVAKYCAKKLHKCVSVFAVDNGKIAFQREATAQEKLQWSYLIFTNKSVKDCGSCALREISETEFNQGELLDYCETENPLALVPFQKHDDESMVGDESVVGDSKRMKPGWSLIRNVFHSKRHTTKSSPKSTFVFQRGVRHSTSLSSSVVYPDHKQINTDPIDDSALDGESGAIVPYGSAIILPPPTLCGDAGSLPEELLILRDKYSSSCRLYSLQELVAATVNFSSENLVGKGGSSVVYRGCLSDGKELAVKILKPSENVLKEFAQEVEIVTTLNHNNIISLSGFCLEGNHLLLVYDFLSRGSLEENLHGNKKDDNSFGWQERYRVAVAVAEALDYLHNGCARAVIHRDVKSSNILLSDDFEAQLSDFGLASWGSSSSQIICTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNERPKGHESLVMWATSILKSGKISQLLDPSLGSEYNNCQIKRMVLAATLCIRRVPRLRPQIGVILKLLHGDEEVTRWAEQEVCAPETHDGFDEELFPTNIQSHLNLALLDLEDDAVSITSTEQCVSLEDYLRGRWSRSSSFD 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06849 690 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 315 420 - -
Mepo3g06849 690 Pfam Protein kinase domain 348 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06849 690 Gene3D HUPs 10 143 IPR014729 -
Mepo3g06849 690 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Mepo3g06849 690 SUPERFAMILY Protein kinase-like (PK-like) 327 616 IPR011009 -
Mepo3g06849 690 Gene3D Phosphorylase Kinase; domain 1 319 420 - -
Mepo3g06849 690 CDD USP_Like 12 137 - -
Mepo3g06849 690 PANTHER OS08G0249100 PROTEIN 69 628 IPR046958 -
Mepo3g06849 690 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06849 690 FunFam Putative receptor-like serine/threonine-protein kinase 421 632 - -
Mepo3g06849 690 Gene3D Transferase(Phosphotransferase) domain 1 421 632 - -
Mepo3g06849 690 Pfam Universal stress protein family 11 136 IPR006016 -
Mepo3g06849 690 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 10 143 - -
Mepo3g06849 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Mepo3g06849 690 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06849 690 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06849 Mepo-Chr3 82221695 82225376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06849 333 612 Trihelix Transcription Factor Family AT1G68690 44.211 3.91e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo3g06849 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06849 - - gmx:100815722 1061.98