Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06840 ATGAAGAAACAATGGTGTGAGATTGAGGCAATAGGCATCAACTACAAGATCACATCAAAACAACCTTCTAAAATTTTCAACAAACCTCCAAAACCTGATGGTGAGAAACCAGAAGATGAAGCAAAAGCTGAACAAAGGCAAGGTGGTGGAGTTAAGCATGTCCTCAAGGATGTTAATTGCATAGCCAAGCCATGTGAAATTCTTGCAATTGTTGGGCCAAGTGGAGCAGGAAAATCATCATTGCTTGAGATTCTTGCTGGTAGAGTTAATCCACAAAATGGTGGTTCTATTTTGGTGAACCAGGAGCATGTAGATAACTCTCAGTTCAGAAAAATCTCAGGGTATGTTACACAAAAAGACACCCTTTTCCCCTTGCTTACAGTTGAAGAAACCATGATGTTTAGCGCAAAACTAAAGTTAAATCTTTCTCCAGAAAAACTAAGCTGTAAGGTTAAGTCACTGATTCAAGAGCTTGGTCTTAGTCATGTTTCAAGTACTAGAGTAGGAGATGGAGATGACAGGGTCCGTGGAATATCCGGTGGCGAGAGGCGCCGTGTTTCCATTGGTGTTGAAGTCATACATGATCCAAAAGTGTTGATTCTTGATGAAGCAACTTCAGGTCTTGACAGTACCTCAGCTCTGCAAATAATTGATATGTTGAAAGTCATGGCTGAATCTAGGGGAAGAACTATAATACTAAGTATTCATCAACCCGGGTTCAGGATAGTGAAGCTGTTCAATTCAATACTGTTGTTGGCAAATGGCAGTGTGTTACATCATGGAAGTGTGGATTTGTTGGATGTGAATCTGAGGCTGATGGGTTTAGAGCTTCCTCTTCATGTTAACGTTGTTGAGTTTGCTATTGAATCCATTGAGACTATTCAGGAACAACAAAAGAGTCAGCAAGTTCTGATTGAACCACGGAAACGGTTACCAGGGACAATTCTACTAAAGAAAGGCAATGATCAAGGTGAAAGTAGAAGCGGTAAGTTTACTCTGCAACAGCTATTTCAACAATCCAAGGTATTTGACATAGAAAACATGAATCTAGGAATGGATTTCACTTGTGATTATGCTAATTCTAGATTGAGAGAAACTATGATTCTAGCTCATAGGTTCTCAAAAAATATTTTCCGTACAAAGGAGCTCTTTGCATTTAGGACAATTCAGATGCTGATTTCAGGGCTGGTTTTGGGATCTATCTTTGGTAATCTCAAAGATGGTCTAGTGGGAGCAGAACAAAAGGTTGGTCTATTTGCTTTCATTTTAACGTTTTTGATATCGAGTGCCATTGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACTTCAAGTGGAAGCTACAGAGTTTCATCTTATGCTATTGCTAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCGCAGTGCCACTTTACTGGATTATCGGTCTCAACAAAAATTTCACGGCATTTTTGCACTTTTTGTTGCTAATATGGTTGGTTTTGTATACCGCAAACTCGGTTGTGGTCTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGAAATTCGATAATCGCCGGTGTCATTGGTTCTTCTTTCTTGTTCTCTGGTTACTTCATATCCAATCATGAAATTCCAAACTACTGGATTTTCATGCATTATTTGTCCCTATTTAAGTATCCATTTGAAGGGTTTCTAATAAATGAGTTCTCCAACTCAAAGAAGTGCTTAGAGTACATGTTTGGGGCATGTGTGATGAAAGGAGAGGATGTACTTAAAGAAGAAGGGTATGGAGGAGAGAGTAGTAGATGGAAGAATGTTGGGGTGATGGTGTGCTTCATCTTTGTTTATAGATTCATTTCTTATGTAATTCTCAGATACAGATGCTCCCAGAGTGCCACCTTCTGA 1920 0.3922 MKKQWCEIEAIGINYKITSKQPSKIFNKPPKPDGEKPEDEAKAEQRQGGGVKHVLKDVNCIAKPCEILAIVGPSGAGKSSLLEILAGRVNPQNGGSILVNQEHVDNSQFRKISGYVTQKDTLFPLLTVEETMMFSAKLKLNLSPEKLSCKVKSLIQELGLSHVSSTRVGDGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEATSGLDSTSALQIIDMLKVMAESRGRTIILSIHQPGFRIVKLFNSILLLANGSVLHHGSVDLLDVNLRLMGLELPLHVNVVEFAIESIETIQEQQKSQQVLIEPRKRLPGTILLKKGNDQGESRSGKFTLQQLFQQSKVFDIENMNLGMDFTCDYANSRLRETMILAHRFSKNIFRTKELFAFRTIQMLISGLVLGSIFGNLKDGLVGAEQKVGLFAFILTFLISSAIEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFAVPLYWIIGLNKNFTAFLHFLLLIWLVLYTANSVVVCFSALVPNFIVGNSIIAGVIGSSFLFSGYFISNHEIPNYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGACVMKGEDVLKEEGYGGESSRWKNVGVMVCFIFVYRFISYVILRYRCSQSATF 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06840 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 263 IPR027417 -
Mepo3g06840 639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 279 IPR003439 GO:0005524
Mepo3g06840 639 MobiDBLite consensus disorder prediction 29 50 - -
Mepo3g06840 639 FunFam ABC transporter G family member 5 40 303 - -
Mepo3g06840 639 Gene3D - 42 298 IPR027417 -
Mepo3g06840 639 Pfam ABC-2 type transporter 366 574 IPR013525 GO:0016020|GO:0140359
Mepo3g06840 639 Pfam ABC transporter 55 206 IPR003439 GO:0005524
Mepo3g06840 639 SMART AAA_5 64 256 IPR003593 GO:0016887
Mepo3g06840 639 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524|GO:0016887
Mepo3g06840 639 MobiDBLite consensus disorder prediction 21 50 - -
Mepo3g06840 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 11 624 - -
Mepo3g06840 639 Pfam ABC-2 type transporter 236 323 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06840 Mepo-Chr3 82124810 82126769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06840 28 296 Calmodulin-binding Proteins AT2G36910 22.408 4.76e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06840 K05681 - gmx:121172640 969.918