Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06836 ATGAACAAAGCTCAAACTGAAATCACTATCCCTCACTTGTTTAGATGTCCTATAAGTCTTGATTTGTTGGAAGATCCAGTGACTTTAACCACTGGCCAAACCTATGATAGATCAAGCATAGAGAAATGGATTTCTGCAGATTCTCAACTCTCAGAAAATCACATGGAATTTGTGGAGATAGCACTTTCTTGCATCCTTAAATTGTTACCTATTGTAAATTTGGAACCTCTAAATATCATCAAAGATGAATCTAAGTTGCAAAGGTTCATATTTTTATTTGAAAAGGGAACTAGTTCGATCAAGACTAGTTTGTGTCTTGTTATAGATCATTCAACAGCAACAGCACAAACAGAAGAGGTTTGTGAAGTACTAGGAAACTCACAAAAACTAGTACATGAAATTGTTCAAGTCCTTGTTAACAAAAATTGTGACAAGGTTTCTGAGGATGCAATTAAGGCCTTATCAGCATTATGTTCATCGGAATCAAACAAAGAGAGTCTAGTGAAAGGAGGAACAATAGATGGAATCATAACATATATTTCAAGATGTGAAAATAGACAGAAGAATTTGGCTCCACTAGCAATGGCAACAATGAAGAAACTTTTGGTGTTAGAGAGTGGTAAAGAAGCATTGGTGAATCATGTAAATGGTATTGAAACTTTGGTGAAGATGGTTTTCAAGGTGTGTAATCAAGAGTGTAGTGAGAGTGCTGTTGAGATACTTTCAATTGTTTGTAGTGATTTTGGGAGTGCTAGAGAGGTAGCTATTGGAGCTGGTGTTTTGAGTCAATTGTTGTTTCTTCTGCAGAGTCAGTGTGGTACCAAAACAAAAACCAAGGCAAGAATGTTGCTCAAGTTGTTGAGATCCAAGTGGAATGAGGAATCGATGCAGCTTACAGATTATACTAAAATGTGA 915 0.3617 MNKAQTEITIPHLFRCPISLDLLEDPVTLTTGQTYDRSSIEKWISADSQLSENHMEFVEIALSCILKLLPIVNLEPLNIIKDESKLQRFIFLFEKGTSSIKTSLCLVIDHSTATAQTEEVCEVLGNSQKLVHEIVQVLVNKNCDKVSEDAIKALSALCSSESNKESLVKGGTIDGIITYISRCENRQKNLAPLAMATMKKLLVLESGKEALVNHVNGIETLVKMVFKVCNQECSESAVEILSIVCSDFGSAREVAIGAGVLSQLLFLLQSQCGTKTKTKARMLLKLLRSKWNEESMQLTDYTKM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06836 304 Gene3D - 110 299 IPR011989 -
Mepo3g06836 304 SUPERFAMILY ARM repeat 50 288 IPR016024 -
Mepo3g06836 304 PANTHER WDSAM1 PROTEIN 7 48 IPR045185 GO:0061630
Mepo3g06836 304 Pfam U-box domain 10 46 IPR003613 GO:0004842|GO:0016567
Mepo3g06836 304 ProSiteProfiles U-box domain profile. 9 44 IPR003613 GO:0004842|GO:0016567
Mepo3g06836 304 SMART Ubox_2 13 68 IPR003613 GO:0004842|GO:0016567
Mepo3g06836 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 59 IPR013083 -
Mepo3g06836 304 SUPERFAMILY RING/U-box 6 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06836 Mepo-Chr3 82104550 82106310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06836 10 289 U-box Gene Family AT3G46510 24.679 5.26e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06836 - - mtr:11418942 548.125