Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06827 ATGCCCACTTGGTGGGGTAAAAAATCCAGCAAACCTAAGGAGCACGAAGAGCCACGTGGCGGCAGCAGCACCAGCAACGGCAGCAGTGGCGGCGGTGGCGTTCTTCACTTCAATTTTAACAAGTCTCCGATCAGAAACTCTAATAAAAACGCTTATAAACCCGATAACCCTAGGAGTTTCGACGATGCTTCTTCTAATTTTAGAAACACTCCCAGATCCAGTAGAGATTTCTCTCCTTCAGTCAATTCTGCCGGCGGTGGTTCTTCCGGTTGTTGGGATTCTGATGCCGGTGATAAGAGAGGGGTTCCTTTGCCTCTTCCTTCTGTTTATTCTACTCAAAGCTTTAGCAATGATCAAGGAATTACTTTTGGATTTGGATCTGCTTCTGTTTCTGGCTCTAGTGTTAGCTCCAATGGTTCTTATGATGATCCTTCAACTTCTAACTCTCAGATTAATACCGCTAGAGGACAATGTGAAGCGAAGTTCAATGTGAGGCCCAAAAGCCCGGGTCCTGGGTCAAGAGGGCCTACAAGCCCAACATCACCTCTTCATCCAAGGTTGAATGTTTTGAGTCTTGACTCACCTACAGGAAGGCAAGAAGATGGAAGGAGTGAGTGTCATCCATTGCCTCTTCCGCCAGGCTCACCGACTAGTTCTTCTTCTCTTCCCAACAACACAAGACCAAATGGACAGATAGAAATCAGTACCACTAACCGTGGCAGGTGGAAGAGAGGAAAGCTTCTAGGTCGGGGAACATTTGGACATGTTTACTTGGGATTCAATAGTGAAAGTGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTCTGTGATGATCAAACCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATAATTTTGCTGAGTAAACTTTCACATCCAAACATTGTTCAATACTATGGAAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATATGTCTCTGGAGGTTCTATTCATAAATTACTTCAGGAATATGGGGCCTTCAAAGAGCCTGTTATCCAAAATTATACTAGGCAGATTGTCTCTGGACTTTCCTATCTACATGCAAGAAATACAGTGCATAGGGATATTAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTGGCGGACTTTGGAATGGCTAAACATATAAATTCTTCATCCTCAATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCACCAGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAGTCAGTATGAAGGGGTGGCTGCAATATTTAAAATCGGGAACAGCAAAGACATGCCTGATATTCCTGATCATCTCTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTGCATAGAGATCCTTCAACCCGCCCTACAGCCCAAATGTTATTAAATCACCCCTTCATTCGAGATCAGTCAGCAACAAAAGCTGCTAATGTCAGAATAACCAGGGATGCTTTTCCATACATGTGTGATGGAAGCCGGACACCGCCAGCTTCCGATCTTCATTCCAGTAGAACTTGTATTGCTTCTAAGGATTCAGATTATGCAACAAAGCCGGTTCTTGCAGCTCCACGAGCAGTAAGGAGCCCAAGAGACAACACAAGAATGATTACATCTTTGCCTGTATCTCCGTGTTCAAGTCCATTGAGACAGTCTGGTCCAGCTCACAAGAGCTGTTTTCTTTCTCCACCTCATCCAACTTATGCAATGATGGGACAAAATACCCTCACTTCATATGAATCATATCCAATGAGATCAAATTCCAAGTTTACTCTTGATCCTTGGCATGAAACACCTATGTACAAAGTCCACACACCTGGTGCATCCCCAAGAACGAGACTTATTTGA 1938 0.4329 MPTWWGKKSSKPKEHEEPRGGSSTSNGSSGGGGVLHFNFNKSPIRNSNKNAYKPDNPRSFDDASSNFRNTPRSSRDFSPSVNSAGGGSSGCWDSDAGDKRGVPLPLPSVYSTQSFSNDQGITFGFGSASVSGSSVSSNGSYDDPSTSNSQINTARGQCEAKFNVRPKSPGPGSRGPTSPTSPLHPRLNVLSLDSPTGRQEDGRSECHPLPLPPGSPTSSSSLPNNTRPNGQIEISTTNRGRWKRGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVCDDQTSKECLKQLNQEIILLSKLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLSYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPHWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPDIPDHLSNDAKNFIKLCLHRDPSTRPTAQMLLNHPFIRDQSATKAANVRITRDAFPYMCDGSRTPPASDLHSSRTCIASKDSDYATKPVLAAPRAVRSPRDNTRMITSLPVSPCSSPLRQSGPAHKSCFLSPPHPTYAMMGQNTLTSYESYPMRSNSKFTLDPWHETPMYKVHTPGASPRTRLI 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06827 645 Pfam Protein kinase domain 243 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06827 645 MobiDBLite consensus disorder prediction 218 238 - -
Mepo3g06827 645 MobiDBLite consensus disorder prediction 179 197 - -
Mepo3g06827 645 FunFam Mitogen-activated protein kinase kinase kinase 240 522 - -
Mepo3g06827 645 SMART serkin_6 242 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06827 645 MobiDBLite consensus disorder prediction 567 587 - -
Mepo3g06827 645 CDD STKc_MEKK1_plant 241 498 - -
Mepo3g06827 645 MobiDBLite consensus disorder prediction 107 157 - -
Mepo3g06827 645 MobiDBLite consensus disorder prediction 567 583 - -
Mepo3g06827 645 ProSitePatterns Protein kinases ATP-binding region signature. 248 271 IPR017441 GO:0005524
Mepo3g06827 645 Gene3D Transferase(Phosphotransferase) domain 1 239 519 - -
Mepo3g06827 645 ProSiteProfiles Protein kinase domain profile. 242 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06827 645 MobiDBLite consensus disorder prediction 21 89 - -
Mepo3g06827 645 SUPERFAMILY Protein kinase-like (PK-like) 239 569 IPR011009 -
Mepo3g06827 645 MobiDBLite consensus disorder prediction 1 238 - -
Mepo3g06827 645 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 30 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06827 Mepo-Chr3 82036283 82041307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06827 1 561 MAP Kinase Kinase Kinase AT1G53570 55.166 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo3g06827 Pkinase 6.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06827 K04421 - gmx:100813122 889.412