Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06823 ATGGCCGAAACAAAATTGATGATTCCAGGGTTTCGTTTTCACCCCACTGATGTTGAGCTGGTAATGTATTTTCTCAAGAGGAAGGTTTTGGGTATTAAATTCCCTTTTCATGTCATTGCTGAACTTGACATTTACAAGTATGCTCCATGGGATCTACCAGAAAAATCTTTCCTCAAGAGTGGTGATTTGCAATGGTACTTCTTTACTCCTGTTGGAAAGAAATATTGCACGGGAGGGAGGATGAATCGGGCAACAGAAGTAGGGTACTGGAAGACTACAGGGAAGGATAGGTCGATTGAACATAGGAATCAAGTGGTGGGGATGATAAGAACCCTGGTGTTTCACACTGGCAAAGCTCCTAAAGGAGACCGAACTGATTGGGTTATGCATGAATACAGACTTGAAGACAAAGACCTAGCTGACAATGGTGTTCCACAGAACTCCTATGTGATTTGTAGGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAGTATGGAAAACCATTTAATGAGAAAGACTGGGATAGCGAAGAGGAAATTGATCATGTACAAGCTGTCCCTGTTGCTGCTGTGTCTGCACCAGCTCTCATTCTACCTAGCTCAAGCCATATTTCTGAAGAAAATCATATGGATCCCTCTGCAAGGGGATGCATTGGACAGACCTCTTTATCAGGTCTATCAAGATTGATGCCCTCTGGCACGACACACCCTTCAGCTCCAGGCAATCAAGCTGATGATGACATTTTATCCATGCTTGCTATTTTTGACAATGAAAATGCATTGGCTGGGAATGAAAACAATGGATCTGAGAAGGTTGATAATTCTGGTCAGGCAAACAATGCTGAAGATGTACCTTATTTAATTCCAAATGAGATTTTTGAGGACTTGGGAGATCTTAACAGCTTGGTTGGATTGGATGAAGGAGGCGGTTTTTCCTATGGCCAAAAAGATGAATACGAAAGGCTTTCTACTGGCGACGTCTCTTTGTTTTGCAACCCCCCTGATTTCTTTGAGTTGCTTGACCTAGAGGTGCCATTATCCTGGCAGACTAAACATGATGGCTGA 1074 0.4311 MAETKLMIPGFRFHPTDVELVMYFLKRKVLGIKFPFHVIAELDIYKYAPWDLPEKSFLKSGDLQWYFFTPVGKKYCTGGRMNRATEVGYWKTTGKDRSIEHRNQVVGMIRTLVFHTGKAPKGDRTDWVMHEYRLEDKDLADNGVPQNSYVICRVFQKEGPGPRNGAQYGKPFNEKDWDSEEEIDHVQAVPVAAVSAPALILPSSSHISEENHMDPSARGCIGQTSLSGLSRLMPSGTTHPSAPGNQADDDILSMLAIFDNENALAGNENNGSEKVDNSGQANNAEDVPYLIPNEIFEDLGDLNSLVGLDEGGGFSYGQKDEYERLSTGDVSLFCNPPDFFELLDLEVPLSWQTKHDG 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06823 357 Pfam No apical meristem (NAM) protein 9 134 IPR003441 GO:0003677|GO:0006355
Mepo3g06823 357 MobiDBLite consensus disorder prediction 228 244 - -
Mepo3g06823 357 MobiDBLite consensus disorder prediction 228 248 - -
Mepo3g06823 357 SUPERFAMILY NAC domain 7 157 IPR036093 GO:0003677|GO:0006355
Mepo3g06823 357 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Mepo3g06823 357 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mepo3g06823 357 FunFam Nac domain-containing protein 86 16 160 - -
Mepo3g06823 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 233 - -
Mepo3g06823 357 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06823 Mepo-Chr3 81989979 81994115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06823 1 353 NAC Transcription Factor Family AT5G09330 44.533 1.24e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g06823 NAM 8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06823 - - adu:107470479 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04412 2 52654081 52657896 Mepo3g06823 3 81989979 81994115 PCT