Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06815 ATGAGGATAGATTTCTGGTTTCTTGTGATTTATTATTTATTGTTGTTAATTCAGAGCACACTGAATTATTCAAAGAGAAGCTCTATTGTTGACATGAGTGGAACTGGCAGAAAGCACTCTTCAAAGTGGGATTTGAGTGATGAGCACAAATTCTCACCTGGTAGCAAGCAAATGCGGTCTGGACGGTCCTCTGCAGATGTTGCTGGTAGCAATAGTTCAGAATGGGCTTATTTGGAAGGAAATGATAAATTAAGACCTGTTACGGGATTTTCATCAAAGGAATCTTATTATGGAGGAAGAGGTTCAAATGAGGACGATGCTATGAATAAAGACCGTAGAGTTTTTAATTCAAGAAGAGAATGGGACACTGATGGAAGTTACAGCAGGAACATGAGACACAGTCAGTCCCCTAAAAATGATTGGAGCAGGAACAGCCGGAGCCGGAGCCCTCCTCGTGGTTTCAGGTGGGATTCAGGAGTTGATGGTAGAAAAAGGACGAGGGTTGGAGGATCAACACGACCGTGCAGAGATTTTGCTGTTGGAAAATGTAGAAGAGGCAGTCATTGCAATTTTCTGCATCATGATAACCAAAATCGTGAGAATAGTTGGGAAGGTAGGCACAGGGAAGATGGAACTCCCAGATACTCTGCTACCCATGAGAGTGTTGACCATTCTCTTAAGAGTGGTAGATCTAATGAAGCTTGTATAAATTTTGCAAAAGGCAGTTGTAGAATGGGAGCATCTTGCAAGTTTGTGCATGATTACGATTCTGAGGGATATGGTAAAGTTTCTATGGATGAGTTCACTAGAGAAAGGGAAGATGAAGCTCTCAGATATCCTGCTACCCATGAGAGCAGGGACCATTCTCTTAAGAGTGGTAGATCTAATGAATTCATTAGAGAAAGGGAAGATGGAGCTCGCAGATATCCTGCTACCCATGAGAGCAGGGACCATTCTCTTAAGAGTGGTAGATCTAATGAATTCACTAGAGAAAGGGAAAATGGAGGTCCCAGATATCCTGCTACCTATGAGAGCAGGGACCATTCTCCCAAGAGTGGTAGATCTAATGAATTCACTAGTGAAAGGGAAGATGGAGCTCCCAGATATCCTACTACCCATGAGAGCAGGGACTATTCTCTTAAGAGTGGTAGATCTAATGAATTCACTAGTGAAAGGGAAGATGGAGCTCCCAGATATCCTACTACCCACGAGAGCAGGGACTATTCTCTTAAGAGCAGTAGATCTAATGACGAATATGGCAAAGTTTTTATGGATGAATTCACTAGAGAATTCACTAGAGAAAGAGAAGTTGGCAGAAGGCACAGAGATAATTCTTTTGAGCAGGGTGGCCGGCATGTGCCTAACCGCACTATTGATGCTCCTTGCAAATTTTTTGCTAGTGGAAATTGTCGAAATGGTAAACATTGTAGGTTTTCTCACGATACGCAAGCATGTAGGAGCCCTGTTAGAAGATTAAGGGATGATAGATGGACAAGAAATCCAAGTAGAGATCATCAAATGTTGGATAGACGAAAATTGAGTGACTCCATTAGTCCAAATAAAAGGCTAAGAGATGATAGGTGGGGTTCAGATAGTGACATGGCTGATCCAGATAGAGTCAAGGACAGTCCAAAGCGGAATGATACAGTTTCTGGCTCTGATACAGCAAAGCTGATTGAGAATAAAAGTGGAAATGTAGGTGCCACAGAGCCAGAATTTACTGATTTGCCTATAACGGATGGATGGGGACATGGTTTAGATAAGAGCGAGCTGCATGCTAAACCACCAATTTTGAGTGATAAGAATGAAGCTGATCTTTGGATAGCAGAAAATACTGGTGCCAACATGCATGGTTCCCAGTCAATAGGTACAACGGACATTTGGCCGGGTGATGCAGAAATGTCTCCTGATTGGAATTATAGGATGGGATCTTCCAGCCATATGGAAGAACATAAACTGAAGGAACATGATGTAAGCCAGGGTGGTACATATTTAGCCATCTCTGAACACAACAGAATACAACTTGCTCCAGGACAAAACATCAATCAGAATACAGAGAATGTAAATCCTTTGCATACTTCCAGCTGCCATGCAGTTGGACAAAGTCAAGTGGATGTTCCCATTCTTTCTTCAAGAGAAGGCATTGTTGATGCTATACACAGCCAGGAAGTATCTACTGAGCAAAAGTACACCGGAGAACCAAATGTTATGGATTCAGGCTTATCACAAGTTAGTTCAATAAATCCTCCAGTTCAAAACGTAGTAAGCAACGAACAGCTTGCTCAACTCACGAATATCTCAGCCTTCACGAATCTCTCAGCCTCTCTGGCTCATATCCTTGGAGCAGGTCAGCAGCTGCCGCAGCTATATGCTGCTTTAAATTCTCATGAATTGAAGGACAGTCCTTCCCAAGCAAAAACTCAAGTGCCTGCAATGCCTGTTTCAATCACATGCATCAAGCCAGATCCTGCCGTTGAACTCCCAAAACAGTATGATCCAATGAATGATAGTATTGAGCAAAAGAATGCTGATGCAAGTGGCGTACCCCCAGCCATTCCTCCAAGTAAAACTATTGCCGAAGTAGAAATTCTGTCACTGTTGTCTAACCCAGGAAGAGAAAACTTTGGTAATTCAATTAAGGGCGCCTCCTCAGAACATGTCAAGAGTGATAATCTAATCCATTTGCAGCCTGGTCAAAACACGGTGGTCGATAAGGATAACAATGAAGAGGTATCTAAGGAAAGGAAAAGTTCTCAAGATGGTCATAAAAGTACCAAAGAGAATGGTCCTCAAAACATGGACCAAAATGCTGGACCTGATGATGCCAAGCAAACAAAGGAAATGAAAGGATCACGTGCATTTAAATTTGCATTGGCTGAGTTTGTTAAGGAGCTTCTGAAACCAACTTGGAAAGAAGGTAAAATCACTAAAGAAGATTATAAAACTATTGTGAAGAAAGTTGTTGATAAAGTAACGGGTACCATCCAGGAGGCCAATATTCCGCAGACACAAGAAAAAATTGACCAATATTTGTCATTTTCTAAACCAAAGCTTAACAAACTTGTACAGGCATATGTGGAAAAGGTTCAGAAGGGTTAG 3099 0.4192 MRIDFWFLVIYYLLLLIQSTLNYSKRSSIVDMSGTGRKHSSKWDLSDEHKFSPGSKQMRSGRSSADVAGSNSSEWAYLEGNDKLRPVTGFSSKESYYGGRGSNEDDAMNKDRRVFNSRREWDTDGSYSRNMRHSQSPKNDWSRNSRSRSPPRGFRWDSGVDGRKRTRVGGSTRPCRDFAVGKCRRGSHCNFLHHDNQNRENSWEGRHREDGTPRYSATHESVDHSLKSGRSNEACINFAKGSCRMGASCKFVHDYDSEGYGKVSMDEFTREREDEALRYPATHESRDHSLKSGRSNEFIREREDGARRYPATHESRDHSLKSGRSNEFTRERENGGPRYPATYESRDHSPKSGRSNEFTSEREDGAPRYPTTHESRDYSLKSGRSNEFTSEREDGAPRYPTTHESRDYSLKSSRSNDEYGKVFMDEFTREFTREREVGRRHRDNSFEQGGRHVPNRTIDAPCKFFASGNCRNGKHCRFSHDTQACRSPVRRLRDDRWTRNPSRDHQMLDRRKLSDSISPNKRLRDDRWGSDSDMADPDRVKDSPKRNDTVSGSDTAKLIENKSGNVGATEPEFTDLPITDGWGHGLDKSELHAKPPILSDKNEADLWIAENTGANMHGSQSIGTTDIWPGDAEMSPDWNYRMGSSSHMEEHKLKEHDVSQGGTYLAISEHNRIQLAPGQNINQNTENVNPLHTSSCHAVGQSQVDVPILSSREGIVDAIHSQEVSTEQKYTGEPNVMDSGLSQVSSINPPVQNVVSNEQLAQLTNISAFTNLSASLAHILGAGQQLPQLYAALNSHELKDSPSQAKTQVPAMPVSITCIKPDPAVELPKQYDPMNDSIEQKNADASGVPPAIPPSKTIAEVEILSLLSNPGRENFGNSIKGASSEHVKSDNLIHLQPGQNTVVDKDNNEEVSKERKSSQDGHKSTKENGPQNMDQNAGPDDAKQTKEMKGSRAFKFALAEFVKELLKPTWKEGKITKEDYKTIVKKVVDKVTGTIQEANIPQTQEKIDQYLSFSKPKLNKLVQAYVEKVQKG 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06815 1032 ProSiteProfiles Zinc finger C3H1-type profile. 229 256 IPR000571 GO:0046872
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 877 905 - -
Mepo3g06815 1032 SMART c3hfinal6 456 482 IPR000571 GO:0046872
Mepo3g06815 1032 SMART c3hfinal6 230 255 IPR000571 GO:0046872
Mepo3g06815 1032 SMART c3hfinal6 171 195 IPR000571 GO:0046872
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 877 949 - -
Mepo3g06815 1032 SUPERFAMILY CCCH zinc finger 459 481 IPR036855 GO:0046872
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 924 939 - -
Mepo3g06815 1032 Gene3D - 455 528 - -
Mepo3g06815 1032 Pfam CCCH-type zinc finger 461 481 IPR041367 -
Mepo3g06815 1032 Gene3D - 219 289 - -
Mepo3g06815 1032 Gene3D - 161 218 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 344 414 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 199 225 - -
Mepo3g06815 1032 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 172 194 IPR000571 GO:0046872
Mepo3g06815 1032 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 233 254 IPR000571 GO:0046872
Mepo3g06815 1032 ProSiteProfiles Zinc finger C3H1-type profile. 461 483 IPR000571 GO:0046872
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 496 581 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 906 923 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 157 171 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 37 55 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 122 171 - -
Mepo3g06815 1032 ProSiteProfiles Zinc finger C3H1-type profile. 169 196 IPR000571 GO:0046872
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 128 151 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 277 414 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 496 548 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 33 68 - -
Mepo3g06815 1032 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 302 1031 - -
Mepo3g06815 1032 MobiDBLite consensus disorder prediction 277 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06815 Mepo-Chr3 81907297 81913445 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo3g06815 zf-CCCH 0.00014 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06815 - K22909 gmx:100783856 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06815 3 81907297 81913445 Mepo3g06815 3 81907297 81913445 ECH