Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06814 ATGGCAACCATCCCATTCATCTTCTTCCTCTTCCTCACCCTCCCCCACTCCTACTACTCTCACTCCTCCCCAAACCTCAACCTCATCCTCCAAGCCTGCAAATCCACCCGCTTCCCTCACCAATGCCAAACCTCCCTCTATTCCCATCCCCACCCAACAAACCCCACCCCCCTTCAAATCATCCACTCCGCCATCTCACTCTCCTATCAAAACCTCAAAACTGCCGAATCATTACTCAACTCCATCCTCCACGCTTCCGTACACAACCACACGCGCACCACCCTCGCTAAAAGCTGTCTCCAGGTCTTCAAATACTCCTACCACCGTACCTCTCTCACCCTCGAAGCTCTCTCACGTGGTCAAACCAAAGACGCTCGTGCTTTCATGAGTGCTGCTTTGGCTTATCAGTATAATTGCTGGTCTGGTCTCAAATACGCTAACGATACTGAATTAGTCTTCAAAACCATGTCTTTTCTTGAATCTCTCACCAACCTATCCAGCAATGCTCTTAGCATGATTCTTTCTTATGATCTATTTGGTAATGATACTGCTTCGTGGAGGACGCCACTCACCGAGCGGGATGGTTTTTGGGAGGATTCTGTGTCTGGTGTGTTTGGGTCTGGACCGTCTGTGCCGATTAATCTTACACCTGATGTTAGGGTGTGTAAAGAGGCTTACACAGACGCCGGCAGTGGGTGTTATAAGACAGTGCAGGAAGCTGTTGATGCTTCGCTTGATGATTTGCCAGTTGGAGAGAGATTTGTGATACATATAAAGGAAGGGGTTTATGAAGAAAGTGTTAGAGTTCCGTTAAGGAAGAGGAATGTTGTGCTTTTGGGTGATGGCATTGGTAAGACTGTTATTACTGGCTCTGCTAATGTTGGATTACAGGAAGGGATGACAACCTATAACTCTGCCACTGTAGGTAAGATTACTTGTGTCAGTGCTTCGTATATGATTATCATAGAAGCATACATGTGA 981 0.4699 MATIPFIFFLFLTLPHSYYSHSSPNLNLILQACKSTRFPHQCQTSLYSHPHPTNPTPLQIIHSAISLSYQNLKTAESLLNSILHASVHNHTRTTLAKSCLQVFKYSYHRTSLTLEALSRGQTKDARAFMSAALAYQYNCWSGLKYANDTELVFKTMSFLESLTNLSSNALSMILSYDLFGNDTASWRTPLTERDGFWEDSVSGVFGSGPSVPINLTPDVRVCKEAYTDAGSGCYKTVQEAVDASLDDLPVGERFVIHIKEGVYEESVRVPLRKRNVVLLGDGIGKTVITGSANVGLQEGMTTYNSATVGKITCVSASYMIIIEAYM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06814 326 PANTHER PECTINESTERASE 18 309 - -
Mepo3g06814 326 Gene3D - 222 323 IPR012334 -
Mepo3g06814 326 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Mepo3g06814 326 SMART PMEI_2 24 172 IPR006501 GO:0004857
Mepo3g06814 326 SUPERFAMILY Pectin lyase-like 229 308 IPR011050 -
Mepo3g06814 326 CDD PMEI-like_3 32 173 - -
Mepo3g06814 326 Pfam Pectinesterase 228 310 IPR000070 GO:0030599|GO:0042545
Mepo3g06814 326 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 173 IPR035513 -
Mepo3g06814 326 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 175 IPR035513 -
Mepo3g06814 326 FunFam Probable pectinesterase/pectinesterase inhibitor 51 27 175 - -
Mepo3g06814 326 NCBIfam pectinesterase inhibitor domain 6 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06814 Mepo-Chr3 81900891 81902000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06814 29 311 Carbohydrate Esterase AT5G09760 55.517 1.40e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06814 - - gmx:100802102 359.377