Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06804 ATGTTGATGATCTCTGATGAAGGAGATAATGATGTGTTCTTTGACTCATTGGAATGTTTGTCACCTTCTAAAGAAGACTCTCTTTTGACTAAACAAGACCTTGGGTATGAGTTATGGCTTAATGAGCCTATTAGTGTGAAGGAAAGAAAACAACGGTTTCTGCAAGAGATGGGTTTAGTTGATGCTTCTTCTCAAAAAGAAATAGTGTGTTGTGAGGAGAGGATCATGGATTGTAGTGGAACAGTATCAAATGGTTGTATTTTATCTGATGCTGTACATGTTTCCGAGAAGTTGGTTGATCCCAAAGATAATGATGATGATGATAAAGAGCTATCATGTTCCAGTCAAGATCTGAGACACAGAGAAGCTGAGACACTAGAAGAATCTAATGTTATTGGTAATGGTAAAAAGAAGAAGAAAAAGTGGTGGAACAAAGTTTTGAACAGAGGGAAAGTTAGATCAAAATCTGGTAATGTGGGTACGAGGAAAACTCTTCAAATCAATGTAAGGCACAATAAAAAAAGTTGGAATGAGTTTAGCGCTGTGTATACTGGTCAAGAGATTAGAGCACATAAAGGTCTAATTTGGACTATGAAATTTAGTCCTAATGGTCAGTATCTAGCAACTGGAGGTGAAGATGGTGTTGTTCGTATATGGTGTGTTTCATCCTTGAAGGCTTCAAGTATTTGTTTTGCTAAAGAAGACACTGACATTAGCAAATTGAAACATGACATGTCTTTTTCTCCAAAGAAATGCTCGAGCAAAACCCCAGCTGTTCTTCCAAGGAAGATTCTCAAAATTGAGGAATCCCCGCTGCAAGAACTATATGGTCATTCTAGTGATGTGATGGACTTGGCTTGGTCTGATTCTGATATGCTTCTTTCCTCGTCTATGGATAAAACAGTTCGCATGTGGAAAATCGGTTGTAATCAATGTTTAAAAGTTTTCCATCACAATGATTATGTGACATGTATTCAATTCAACCCAGTTGATGAAAATTATTTCATCAGTGGCTCCATAGATGGTAAAGTCCGAATATGGGGAGTACATGAAGAGCGAGTTGTTGACTGGGCAGACGTACGAGATATCATAAGTGCTATAAGTTACCAGCCAGATGGGAAGGGGTTTGTAGTTGGTTCCCTTTCTGGTACTTGCCGCTTTTATGTTGCTTCAGGTAAACAATTCCAGCTTCAGGCGAAGATTCGTGTCAATGAAAAAAAGAGATCATCTAGCAACAAGATTACTGGCATTCAGTTTTCCCAGAAAAACCATCAGAGAGTTATGATCACATCACAAGATTCCAAAGTTAGAATATTGGAAGGCCATGAACTTGTTCAGACATATAAAGGCCTTTCAATGTCAGGAAGTCAGATGTCTGGTTCATTTACATCAAGTGGAAAACACATAATTTCAGTCGGAGAGGACGCTCGTGTGTATATTTGGAACTTCAATGACTCCGAAGGCTATTTTTCCAAACAGAGAAAAACCGAGAGTTCTTGTGAGTACTTTCGCTCCAAGGGGGTTACTGTTGCAATACCTTGGTCAGGCATGACTGCAGAAAGAAGCTGCTCTCTCAGCGATTTTGCCAACTATTCTTCCGAAACTCAACGACAATGCGTTAGAGAGTCTGAACGTTTTTCTTTTGGTAGTTGGTTCTCCATTGATGGTTCATGCCGAGGTTCTATGACATGGCCTGAAGAGAAACTTCCCAGTTGGGATTCGCCTCTTTCAGAAGTTGAATCTGATGATGAAGAGCTATGTCTTAAGAATCTATGCCATGACAATTGTGTGCCAGAAACATGGGGACTGTCATTTGTTGCAGCAGGTCTTGATGGAACGATCAAGACATTTCACAACTTTGGATTTCCTGCGAGACTTTAA 1881 0.3955 MLMISDEGDNDVFFDSLECLSPSKEDSLLTKQDLGYELWLNEPISVKERKQRFLQEMGLVDASSQKEIVCCEERIMDCSGTVSNGCILSDAVHVSEKLVDPKDNDDDDKELSCSSQDLRHREAETLEESNVIGNGKKKKKKWWNKVLNRGKVRSKSGNVGTRKTLQINVRHNKKSWNEFSAVYTGQEIRAHKGLIWTMKFSPNGQYLATGGEDGVVRIWCVSSLKASSICFAKEDTDISKLKHDMSFSPKKCSSKTPAVLPRKILKIEESPLQELYGHSSDVMDLAWSDSDMLLSSSMDKTVRMWKIGCNQCLKVFHHNDYVTCIQFNPVDENYFISGSIDGKVRIWGVHEERVVDWADVRDIISAISYQPDGKGFVVGSLSGTCRFYVASGKQFQLQAKIRVNEKKRSSSNKITGIQFSQKNHQRVMITSQDSKVRILEGHELVQTYKGLSMSGSQMSGSFTSSGKHIISVGEDARVYIWNFNDSEGYFSKQRKTESSCEYFRSKGVTVAIPWSGMTAERSCSLSDFANYSSETQRQCVRESERFSFGSWFSIDGSCRGSMTWPEEKLPSWDSPLSEVESDDEELCLKNLCHDNCVPETWGLSFVAAGLDGTIKTFHNFGFPARL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06804 626 ProSiteProfiles Trp-Asp (WD) repeats profile. 188 229 IPR001680 GO:0005515
Mepo3g06804 626 ProSiteProfiles Trp-Asp (WD) repeats profile. 315 357 IPR001680 GO:0005515
Mepo3g06804 626 SUPERFAMILY WD40 repeat-like 186 485 IPR036322 GO:0005515
Mepo3g06804 626 SMART WD40_4 309 348 IPR001680 GO:0005515
Mepo3g06804 626 SMART WD40_4 441 482 IPR001680 GO:0005515
Mepo3g06804 626 SMART WD40_4 181 220 IPR001680 GO:0005515
Mepo3g06804 626 SMART WD40_4 394 440 IPR001680 GO:0005515
Mepo3g06804 626 SMART WD40_4 268 306 IPR001680 GO:0005515
Mepo3g06804 626 SMART WD40_4 350 389 IPR001680 GO:0005515
Mepo3g06804 626 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 275 307 - -
Mepo3g06804 626 PRINTS G protein beta WD-40 repeat signature 207 221 IPR020472 -
Mepo3g06804 626 PRINTS G protein beta WD-40 repeat signature 335 349 IPR020472 -
Mepo3g06804 626 PRINTS G protein beta WD-40 repeat signature 293 307 IPR020472 -
Mepo3g06804 626 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 315 347 - -
Mepo3g06804 626 Pfam WD domain, G-beta repeat 270 306 IPR001680 GO:0005515
Mepo3g06804 626 Pfam WD domain, G-beta repeat 187 219 IPR001680 GO:0005515
Mepo3g06804 626 Pfam WD domain, G-beta repeat 311 347 IPR001680 GO:0005515
Mepo3g06804 626 Gene3D - 175 513 IPR015943 GO:0005515
Mepo3g06804 626 PANTHER WD REPEAT DOMAIN 44 115 623 IPR040324 -
Mepo3g06804 626 ProSiteProfiles Trp-Asp (WD) repeats profile. 275 315 IPR001680 GO:0005515
Mepo3g06804 626 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 188 219 - -
Mepo3g06804 626 FunFam WD repeat-containing protein 44 172 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06804 Mepo-Chr3 81802784 81806900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06804 272 479 U-box Gene Family AT2G33340 26.906 7.54e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06804 3 81802784 81806900 Mepo3g06804 3 81802784 81806900 ECH
Mepo2g04399 2 52524224 52528172 Mepo3g06804 3 81802784 81806900 PCT