Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06802 ATGGGTTTAGTCTATCTCCACAATCACAACCCACCGATTATACATAGGGATGTCAAGTGTGATAACATATTTATAAATGGTCATCAAGGAGAAGTTAAGATTGGAGATCTAGGGTTGGCAACTCTCCTGAAGCAGAATAATGCCAAGAGTGTAATTGGAACCCCGGAGTTTATGGCGCCTGAACTATACGACGAAAATTATAATGAATTAGCCGACATATATTCTTTTGGGATGTGCATGCTGGAGTTGGCTACTTCTCAGTATCCTTATAGAGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCAGTTTCTCTTTCTACAATCAAAGATCCAGAAATAAAATCATTTATTGAGAAATGTCTTGTTCCAGCATCTCAAAGATTATCAGCAAAGGAGCTTCTGATGGACCCTTTTCTTGAAGTGAATTTTTCAGTAAAGAATCGTCCTCTTCCATTACCAGATATTGTTCTACCTAAATTCGGAGGCTTTGAAAATCGCTGTCTAATGTCAGAAGGTCCTGCTAGTGCACGTATTGGATCCAATTCACTGGAACTTGGTGATACCAATGAGCAACCATTGATCACTGTATCTTATAATTCTGTTGATGATGCACCTCCTTCTCCATGTGTTGAGATACGAAGGTTGATGGGAGTTGATAGATTTTTTCTCAAAGGCGAAGCAAATGACACGAATTCTGTATCATTAGTGCTCCGGATAATTGATCAGGGTGGGCGAGCAAGAAATATCCATTTCATATTCTACCTCGACAGTGATACGGCCATGTCAGTGTCAAGTGAAATGGTTGAGCAACTTGAACTTGCCGAGCACAATGTTAAATTCATCGCCGAGTTGATTGATTTGTTATTGACAACATTGATTCCTGATTGGAAACCTTGTGTAGCGATTGACCACTTAATTTCTCCAAATGGTAGACGAACTCATATGAGCCAACAGAAACAACTCTCACAGTTGGCAAAGTACAAACAAAACTCGGTAGATTCTAGCCAAATTATGAGGGAATATGTACGTCCCTCAACCTCACATGAGAGATTAGCTGAAAAAGAAAACAGTGATAATATGAATTTTGAAGATGTTTTCTCCCATGCAAGCATTGGTCTTCAAAGAACAACAAAGACAGATGATTTCTATTCTATGACATCATATACTTCAGCAACATCTGACTACAATGATAAGAATTTTTCTACAGTTTCATTCATGTCTGCTAGGTCAGGATTCACAGACTTCAACTTTCCCACCGTAAATGGGTGGGGGAGCCAATCTTCGCTTGCATCTGAAATCGGGGCATCCTCTGATAAAAAGAGCAAGTTTCCATGCATGGAAAACAACAATTATCCCCTTAGTACTTCCTCATTCAATGAAGCTGAGGATGAGTTAAAAGTAGAGTTAGAGAAGATTGAACGACAATATCAAGAGGCAATGAAAGATTTATGCAAAAGAAGACACGAGGCCATGGTGGAGACCAGAAAGAGGCTATCACAAAAAAATTCAATCATAGAATAA 1542 0.3891 MGLVYLHNHNPPIIHRDVKCDNIFINGHQGEVKIGDLGLATLLKQNNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELATSQYPYRECRNSAQIYKKVSSGIKPVSLSTIKDPEIKSFIEKCLVPASQRLSAKELLMDPFLEVNFSVKNRPLPLPDIVLPKFGGFENRCLMSEGPASARIGSNSLELGDTNEQPLITVSYNSVDDAPPSPCVEIRRLMGVDRFFLKGEANDTNSVSLVLRIIDQGGRARNIHFIFYLDSDTAMSVSSEMVEQLELAEHNVKFIAELIDLLLTTLIPDWKPCVAIDHLISPNGRRTHMSQQKQLSQLAKYKQNSVDSSQIMREYVRPSTSHERLAEKENSDNMNFEDVFSHASIGLQRTTKTDDFYSMTSYTSATSDYNDKNFSTVSFMSARSGFTDFNFPTVNGWGSQSSLASEIGASSDKKSKFPCMENNNYPLSTSSFNEAEDELKVELEKIERQYQEAMKDLCKRRHEAMVETRKRLSQKNSIIE 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06802 513 Coils Coil 462 489 - -
Mepo3g06802 513 SUPERFAMILY Protein kinase-like (PK-like) 2 146 IPR011009 -
Mepo3g06802 513 FunFam WNK protein kinase 1 154 - -
Mepo3g06802 513 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 499 - -
Mepo3g06802 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 13 25 IPR008271 GO:0004672|GO:0006468
Mepo3g06802 513 Gene3D - 238 344 - -
Mepo3g06802 513 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06802 513 SMART serkin_6 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06802 513 Pfam Protein kinase domain 2 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06802 513 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06802 Mepo-Chr3 81760237 81762129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06802 2 315 MAP Kinase Kinase Kinase AT1G49160 69.108 6.59e-158 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mepo3g06802 Pkinase 3.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06802 K08867 - gmx:121175054 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06802 3 81760237 81762129 Mepo3g06802 3 81760237 81762129 ECH
Mepo2g04396 2 52480513 52483369 Mepo3g06802 3 81760237 81762129 PCT