Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06801 ATGAGTTTGGCGGACCCAGAATGCTTTGAGGAAGGTTCGGCTCTTCTTGAGCCTCCTGATCCAGATGTTGTTGAAATCGATCCTACTTGTCGTTACCTTAGGTATAAGGAAGTCATTGGCAAAGGAGCTTTCAAGACTGTTTATAAGGCATTTGATGAAGTCACTGGGCTTGAAGTTGCTTGGAGCCAAGTTCGGATTGATGAGGTATTGCAATCACCAGGTGACCTAGAAAGGCTCTATTCAGAAGTGCATCTCTTGCGGTCGTTGAAGCACAGTAACATTATAAGGTTCTACAATTCCTGGATTGATGACAAGCACGGGAATGTTAACATGATTACCGAGTTGTTCACCTCAGGGAGCCTCAGACAGTGTGTTCACTATACTTTATAA 390 0.4385 MSLADPECFEEGSALLEPPDPDVVEIDPTCRYLRYKEVIGKGAFKTVYKAFDEVTGLEVAWSQVRIDEVLQSPGDLERLYSEVHLLRSLKHSNIIRFYNSWIDDKHGNVNMITELFTSGSLRQCVHYTL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06801 129 Pfam Protein kinase domain 35 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06801 129 ProSiteProfiles Protein kinase domain profile. 33 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06801 129 SUPERFAMILY Protein kinase-like (PK-like) 31 125 IPR011009 -
Mepo3g06801 129 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Mepo3g06801 129 Gene3D Phosphorylase Kinase; domain 1 18 114 - -
Mepo3g06801 129 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 21 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06801 Mepo-Chr3 81759199 81760098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06801 7 127 MAP Kinase Kinase Kinase AT3G18750 77.686 6.96e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mepo3g06801 Pkinase 1.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06801 K08867 - pop:18099005 197.593