Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06789 ATGAGACATCTTCTCCAAAATAATCTATTATTTTTCACTTCATCATTGCGATCTCGCGCTCTTCTTCTTCTTCGCTTTCATCTCTGCGAATTCTCATCTTCTCCGGCTCCGTCCTATTCTCACTGGAAGCGTCTCGATGACGAGTCACGTAACGTTAGGGTTTCGGTGTGGTGGGATTTCGAGAACTGCAGCGTGCCGGTCGGCGTTAATGTTTCCAGAGTAGCCCCGTCAATCACTGACGCCGTTAGAGCCAACGGGATTAAAGGTCCTGTTCATATTACTGCTTTCGGTGATGTGATGCAGCTTTCTAAATCTAATCAAGAGTCACTTGCTTTCACTGGCATTCATCTCACTCACATTCCCAATGGTGGAAAGAATAGTGCTGATAGATCTCTTCTTATTGATCTTATGTACTGGGTTTCCCAAAATCCTCCACCTGCACATCTCTTTCTGATATCTGGTGATGGGGACTTTGCTGGCATATTGCACCGATTAAGGATGAATAACTACAATATTTTGCTTGCTATTCCTGGAAAGGCTCCTGATGTTCTCCGCAGTGCAGCAACTATAATGTGGCAGTGGACTTCATTGCTCAAAGGAGAAAATCTAACTGGAAAACATTTCAACCACCCTCCCGATGGTCAGTTTGGTTCTTGGTATGGAAATTCTAAAGTGCCACTTGAAAACCCCTTTTCAGCTACTGGGCAGTCAACATCTTCACAAAATGTACAAATCGTGGAAATCAATGAACCTTCCTCAGACTTAAAGTGGGCTGAAGGAGTTCCAAAGTCAGTTATAAGGCAGGTTAAAGATATATTGAGTTCACATCCAAATGGTATCTCCGCGGGAGATCTTCGTGCAGAGCTGGCCAAACGTGGTGTTATTTTGGGTAGAAGCATGTTTGGATATAGAAGACTTTCCCGCTTTCTATCATCAATACCAGATGTACATCTCCAGAATTTAGGAGACGGTAATTTTTGTGTGTGTTTGATCCCCTCAGAGTACCCTGAACCCTCTGAGAAAAGCACTGTACCATCGACGACATATGCTGTTAAGAATGAGGAGAAGGACTATACAACAACTCCAAAGCTACACGGTGAAGATAAAGAGTTGGATGGAGACAAACATAGGACTCCCTCAATGTCTTCATCACATGAAAGGATCGTTGAGGATGATTCAAAATCATTCCAATCTTTCCCTTCACAAGAAAAACCTATCGGAGAAGATGTGTCGCATAAATCATGGGGCTATACAACAATTCCAAAGCTACACAGTGAAGATAAAGACACGGGCAAAGTCGGACATAAGACTCCCTCAATGTTTTCATTGCATGAAAAGACCATTAAGGATGATTCAAAATCATTCCAATCTACACCTTCACAAGGAAAACCTATTGAGGAAGATGTGCGATGTAAATCATCTGGAAGAAGTGAGAAGGTTGAGGATGTATCTAATGTACAATTGTCGGAGAGTCAACTTTCACCAAAAGACAATGATGGTTCCAAAACTGAGACTGATTCCTTTAAAGTGAGATCTAAAAAGTTTTCTGAAGATAAAATTGTTAGGTCTGAGGATGCAAATCCAAAAGATCTTGAAAAATATACCGCTTCAAGGGATCCCTCTGCAGGTATTGATAACACAATGGTGGAAAGCAATGATAGAGCAAATTGTGAATCTGGAAAATCTATAGCGAGGAACAAACATGTGAATCAACCTAGAAAGAAGGTTGATGATCACAGCCCATATTCTTCAGCAGCTGAGGACTCTCTAGTTGACAAAAGACCCGATGGTCGTGCTGAAACTTACAGTGAAAGATCAACTTTGTTTAGCTGGATTAAAAGCTGGTGGCCATTTTCGAAAAGCAACGTGAAGGCTGATAATTTGACTGCTCATCAGAACAAGGTGGGCAGTAATTTTGAGGATCCTAGGTTAACTGAATTGGACCAGACTACTGGTAATGTTGAAGAGCGCAAGTCATTAGAACCACATCAAGATGTCAGTCATTCTGGAAAGCCTGAGGATTCCAAGTTATCTGAACTGGACCAGACTGCTAGTAATCTTGAAGAGGCCAAGCCATTAGAACCACATCATCAGGATATCAGTTGTTCTGGAAAACCCGAGGATTCCAAGTTTTCTGAACTAGACCAGACTGCTAGTAATCTTGAAGAGGCCAAGCCTTTAGAACCACACCAGGATGCTGGTCATTCTGGAAAGCCTGAGTTATTTTCTTTGGGTTCCTTTTGGAATGACATGGAATCTTTTGTTTTCACCCCCAAAGGATCACTTCTTATTTCCCAGTCTAAAAGCAGGGAGGATTTGGCTCATAAATTACAAAAGCATGGACCCATGGTTCTAAAATCTCTTTCTGAGAATTATATCTTTCAATTGGTGGAATTGTTAGTAGCAGAAAAAAGATGGTTGGAGGAAAGCACCTCACAAGCATTTCCTTTTCGGCTAACTCATTCAGTTCAGAAGAGTGCACTGTCTGGCCACACTAATGGTGCAAATGGTTTGAGATCTCTCTTTCTAAGTAAAACATCGCAGCCCAACTTGCAAAAGTCATTTGAACATGACAGGGAGAAACCCACTCAGAGTATTCAGCGAACGGGAGTTTCCAGACCTGCCACTGAAATAAAATATATTGAGAAGTTTAGAAGTGATATATTACAAGATTGTCAGAGACTGGTAACTGATATATTGAAGGAAAACCCAGAGGGTTATAATTTAGCTTCTTTTCGAAAGCAATTTGCTAATAGATATGGCTATACCCTTGATGTCAAGAAGCTTGGTTATCAGAAGATATCATACTTGATACAGATAATGCATGGGGTTAAATTAGAACCCTATTGTTCCAAAAAAAATAAAAATTCAGAATCCACTTATATGTATCCTGCTCCTGCTGTTTGTGCTTCTGACTCAGAAACATCTATCTTAAAAACTGATGCAGCCAATGCTAATCATGAATTCAACTCAGATGATGAATTATCTGATACAGCCGCGAAAGAGGATAACATGGAATCACCTTGGGAGGAATTAGGTCCTGTTTCTGCTAAAAAACCAAGTCAGAATGATCTGGAATCAAATTCAATTCTGAAAGCCATTGAAATGGATACACCAAAGCATCCTGATTATGAACCCATTGTCTCAGATGATGATTCTTCTGAATCCGACGAGGATAGTTCTTGTTTAACTCAACCAGAAGAGCTAGGAAAGCCAAAATATGATGAACAAGACAGCTCTTTAATTCAAACTTTGGATATCTTCCATAGCAGCAAGGAAGGAGCAAATAGTTGTGATGATCTGCTTAACATGTTAGATTCATCCATAAATTCGAAACAGGGTTTCGTTTCCAAAAATACTTCAGGGAATCACAGAGAAAAGCAAAGATCTCAAAGGTATTGTTTTGTTGATGACCCAGCCTTACCCGACAACGACAAGTGTATTGGTGGGCTACCAGGTAACTCAAAGAAAGAGGATAGTGCGAACATGCAAAACTGA 3498 0.4065 MRHLLQNNLLFFTSSLRSRALLLLRFHLCEFSSSPAPSYSHWKRLDDESRNVRVSVWWDFENCSVPVGVNVSRVAPSITDAVRANGIKGPVHITAFGDVMQLSKSNQESLAFTGIHLTHIPNGGKNSADRSLLIDLMYWVSQNPPPAHLFLISGDGDFAGILHRLRMNNYNILLAIPGKAPDVLRSAATIMWQWTSLLKGENLTGKHFNHPPDGQFGSWYGNSKVPLENPFSATGQSTSSQNVQIVEINEPSSDLKWAEGVPKSVIRQVKDILSSHPNGISAGDLRAELAKRGVILGRSMFGYRRLSRFLSSIPDVHLQNLGDGNFCVCLIPSEYPEPSEKSTVPSTTYAVKNEEKDYTTTPKLHGEDKELDGDKHRTPSMSSSHERIVEDDSKSFQSFPSQEKPIGEDVSHKSWGYTTIPKLHSEDKDTGKVGHKTPSMFSLHEKTIKDDSKSFQSTPSQGKPIEEDVRCKSSGRSEKVEDVSNVQLSESQLSPKDNDGSKTETDSFKVRSKKFSEDKIVRSEDANPKDLEKYTASRDPSAGIDNTMVESNDRANCESGKSIARNKHVNQPRKKVDDHSPYSSAAEDSLVDKRPDGRAETYSERSTLFSWIKSWWPFSKSNVKADNLTAHQNKVGSNFEDPRLTELDQTTGNVEERKSLEPHQDVSHSGKPEDSKLSELDQTASNLEEAKPLEPHHQDISCSGKPEDSKFSELDQTASNLEEAKPLEPHQDAGHSGKPELFSLGSFWNDMESFVFTPKGSLLISQSKSREDLAHKLQKHGPMVLKSLSENYIFQLVELLVAEKRWLEESTSQAFPFRLTHSVQKSALSGHTNGANGLRSLFLSKTSQPNLQKSFEHDREKPTQSIQRTGVSRPATEIKYIEKFRSDILQDCQRLVTDILKENPEGYNLASFRKQFANRYGYTLDVKKLGYQKISYLIQIMHGVKLEPYCSKKNKNSESTYMYPAPAVCASDSETSILKTDAANANHEFNSDDELSDTAAKEDNMESPWEELGPVSAKKPSQNDLESNSILKAIEMDTPKHPDYEPIVSDDDSSESDEDSSCLTQPEELGKPKYDEQDSSLIQTLDIFHSSKEGANSCDDLLNMLDSSINSKQGFVSKNTSGNHREKQRSQRYCFVDDPALPDNDKCIGGLPGNSKKEDSANMQN 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 1139 1165 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 540 566 - -
Mepo3g06789 1165 ProSiteProfiles OST-type HTH domain profile. 888 966 IPR025605 -
Mepo3g06789 1165 Gene3D - 884 953 IPR041966 -
Mepo3g06789 1165 Pfam NYN domain 53 188 IPR021139 GO:0004540
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 465 479 - -
Mepo3g06789 1165 Gene3D - 46 196 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 356 393 - -
Mepo3g06789 1165 CDD PIN_limkain_b1_N_like 53 177 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 633 716 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 690 712 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 497 536 - -
Mepo3g06789 1165 Gene3D - 262 331 IPR041966 -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 339 355 - -
Mepo3g06789 1165 ProSiteProfiles OST-type HTH domain profile. 261 332 IPR025605 -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 480 496 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 650 678 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 1037 1076 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 986 1008 - -
Mepo3g06789 1165 CDD LOTUS 889 944 - -
Mepo3g06789 1165 Pfam OST-HTH/LOTUS domain 889 940 IPR025605 -
Mepo3g06789 1165 Pfam OST-HTH/LOTUS domain 263 325 IPR025605 -
Mepo3g06789 1165 PANTHER LIMKAIN B LKAP 32 897 IPR024768 GO:0005777|GO:0010468
Mepo3g06789 1165 CDD LOTUS 262 330 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 633 649 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 337 604 - -
Mepo3g06789 1165 MobiDBLite consensus disorder prediction 983 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06789 Mepo-Chr3 81635547 81640737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06789 53 200 C2H2 Transcription Factor Family AT5G61190 44.595 8.91e-37 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06789 - - mtr:11420708 2219.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06789 3 81635547 81640737 Mepo3g06789 3 81635547 81640737 ECH