Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06769 ATGAAACCCTTGTATAGCACAAACACTCTCCTACTCCTCCTTTCACTATTCCTTCTCCACTTAGCACCATACCTCTCTGCTTCTTCTTCTCAAAGAGACCCAACTTCACAACTTCTCAACTTCAAACAATCTCTCCCAAACCCATCCCTTCTCCATAACTGGCTCCCTAATAATAACCCATGTTCATTCACTGGTATCACCTGCAACCAAACCACCATAACTTCTATAGACCTCACCTCAATCCCTCTCAACACCAACCTCACCACCATCACAACCTATCTCCTCACCCTCCCTCACCTCCAAATCCTCACCCTCAAATCAACAAACATCACATCCTCACCACCCATTCCTCTCTCCCACACCAAGTGCACCTCCACCCTCACCACACTAGATCTATCACAAAACACACTCTCTTCATCTTTCTCAGACCTCTCCTTCCTCTCCACATGCTTAAACCTTAATTCTCTCAACCTATCCAACAACTTCCTCGAATTCGATTCTCCTAAATGGACTCTCGCTTCATCTCTCAAATCTCTCGACCTTTCCGAAAACAAAATCAACGGTCCAAATTTCTTCCACTGGATCCTCAACCATGACTTAGAGCTTTTATCTCTCAGAGGAAACAAAATCACCGGAGAAATCGACTTCTCCGGTTACAACAAGCTCCGTTTCTTAGACATTTCTTCAAACAATTTCACTGTTTCAATTCCATCCTTTGGTGAATGTTTATCTCTGCAATACCTCGATATTTCAGCAAACAAGTACTTCGGTGACATTTCAAGAACACTGTCACCTTGTAAGAATCTTCTTCATCTCAATATCTCCGGTAACCAGTTCACCGGTCCGGTTCCTGAACTTCCCTCCGGTTCGTTACAGTTTCTTTATCTTGCTGCAAATCACTTCGCCGGAAAAATACCGGCGCGTTTAGCTGAGCTTTGTTCAACGCTCGTGGAGCTTGATCTTTCTTCCAATAATCTCACCGGTGAAATACCACGTGAGTTCGGCGCGTGTACTTTGTTGACATCGTTTGATATTTCGAGCAACAACTTCGCCGGTGAACTTTCGGTGGAGGTTTTATCGGAGATGAGTAGTTTGAAAGAGCTAGCGGTGGCGTTTAACGACTTTGCGGGTCCAGTTCCGGTGTCTCTGTCGAAGATAACGGGTTTGGAATTGTTAGATCTGAGTTCGAATAACTTCACCGGAACGATTCCGAAGTGGCTTTGTGAAGAAGAGTTTGGGAATAATTTGAAGGAAATTTACTTGCAAAATAACGGTTTCACGGGTTTTATTCCACCAACGCTAAGTAACTGTTCAAATCTCGTTGCTCTTGATTTAAGTTTCAATTATCTAACTGGAACCATTCCTCCAAGTTTTGGTTCTCTTTCGAAGCTTCGTGATTTAATCATGTGGTTGAATCAGCTTCATGGGGAAATTCCTCAAGAGCTTGGAAATATGGAAAGTTTAGAGAATTTGATTCTTGATTTCAATGAGTTGAGTGGAGGTATTCCATCTGGGTTGGTGAATTGCAGTAAGTTGAATTGGATCTCGTTGTCGAATAACAGGCTTAGTGGTGAGATTCCAGCGTGGATTGGGAAGCTTTCGAATTTGGCTATTTTGAAGCTGAGTAATAATTCTTTCTCCGGTAGGGTTCCACCGGAGTTAGGAGATTGCCCTAGCTTGTTATGGTTGGATCTGAATACAAATTTACTCACAGGAACAATACCGCCGGAGTTGTTCAAGCAGTCGGGGAAAGTCACGGTGAATTTCATTAACGGGAAGACGTATGTTTACATTAAGAATGATGGAAGTAGAGAGTGTCATGGAGCTGGGAACTTGCTGGAGTTTGCAGGGATTAGTCAGAAAAAATTGAACAGAATTTCGACGAAGAACCCTTGCAATTTCACTAGGGTTTATGGAGGTAAGCTTCAGCCAACGTTTACCACTAATGGTTCAATGATCTTTTTGGATATTTCACACAACATGTTGTCTGGTCCTATTCCTAAGGAAATTGGTGAAATGCACTATCTCTACATTTTGCATTTGAGTTATAACAACTTGTCTGGTAGCATTCCTCAAGAGCTTGGTACGATGAAGAATCTCAACATTCTTGATCTTTCATACAATAAGCTACAAGGTCAAATTCCACAAGCCTTGGCAGGGCTTTCATTGCTCACAGAGATTGACTTGTCTAACAATTTTCTCTGCGGAATGATTCCGGAATCCGGTCAATTCGACACTTTTCCGCCTGTTAAGTTTCAGAACAACTCTGGTCTCTGCGGGGTCCCTCTTCCTCCATGTGGGAAAGACGCCGGTGCTAATGCTGCACAGCACCAGAAGTCTCATAGGAGACAGGCATCCCTTGCAGGGAGTGTGGCAATGGGATTGCTTTTCTCTCTTTTTTGCGTTTTTGGTTTGATCATTATTGCTATTGAGACAAGAAAGAGGAGGAAGAAAAAGGAGGCTGCCATTGATGGCTACATTGACAATTCTCATTCTGGTAATGGCAATAATTCTGGCTGGAAACTGACCAGTGCCCGCGAAGCTCTCAGCATAAACCTTGCAACGTTTGAAAAGCCCCTCCGAAAGCTCACTTTCGCGGATCTTCTAGAGGCAACCAATGGCTTTCACAACGATAGTCTCATTGGTTCCGGTGGTTTCGGTGACGTGTATAAAGCTCAGCTGAAAGATGGAAGTGTCGTGGCCATCAAGAAACTAATACATGTAAGTGGACAAGGGGACAGGGAATTCACAGCAGAGATGGAAACCATTGGCAAAATCAAGCACAGAAACCTTGTTCCTCTTCTGGGATACTGCAAGGTTGGAGAGGAAAGATTGTTGGTCTATGAGTACATGAAATATGGAAGTCTAGAAGATGTCCTGCATGACCCAAAGAAAGCTGGGATCAAGATGAATTGGTCAGTGAGGAGGAAGATTGCAATTGGAGCTGCAAGAGGATTGGCTTTTCTTCACCATAATTGTATCCCACACATCATTCATAGAGACATGAAATCAAGCAATGTGTTGCTTGATGAAAATTTGGAAGCAAGGGTCTCTGATTTTGGAATGGCTAGGATGATGAGCGCTATGGATACTCATTTAAGCGTAAGCACGTTGGCAGGCACACCGGGTTATGTTCCCCCAGAATACTATCAGAGCTTTAGATGCTCCACAAAAGGTGATGTTTATAGTTATGGTGTAGTTTTGTTGGAGTTGCTGACGGGGAGAAGACCGACGGACTCAGCTGATTTTGGTGATAACAATCTTGTTGGATGGGTTAAACAACATGCCAAACTTAAAATAAGTGATGTTTTTGATCCAGAGCTAATGAAAGAAGACCCCAATATGGAGATTGAGCTTTTGCAACATTTAAAGGTAGCTTGTGCTTGTTTGGATGATAGACCTTGGCGGCGACCTACAATCATTCAAGTCTTGGCAATGTTCAAGGAAATACAAGCAGGTTCTGGGATGGATTCTCAATCTACTATAGCCACTGAAGATGAAGGTTTCAATGCCGTTGAGATGGTTGAAATGAGCATTAAAGAAGTCCCTGAATTAACCAAGCATTAG 3567 0.4306 MKPLYSTNTLLLLLSLFLLHLAPYLSASSSQRDPTSQLLNFKQSLPNPSLLHNWLPNNNPCSFTGITCNQTTITSIDLTSIPLNTNLTTITTYLLTLPHLQILTLKSTNITSSPPIPLSHTKCTSTLTTLDLSQNTLSSSFSDLSFLSTCLNLNSLNLSNNFLEFDSPKWTLASSLKSLDLSENKINGPNFFHWILNHDLELLSLRGNKITGEIDFSGYNKLRFLDISSNNFTVSIPSFGECLSLQYLDISANKYFGDISRTLSPCKNLLHLNISGNQFTGPVPELPSGSLQFLYLAANHFAGKIPARLAELCSTLVELDLSSNNLTGEIPREFGACTLLTSFDISSNNFAGELSVEVLSEMSSLKELAVAFNDFAGPVPVSLSKITGLELLDLSSNNFTGTIPKWLCEEEFGNNLKEIYLQNNGFTGFIPPTLSNCSNLVALDLSFNYLTGTIPPSFGSLSKLRDLIMWLNQLHGEIPQELGNMESLENLILDFNELSGGIPSGLVNCSKLNWISLSNNRLSGEIPAWIGKLSNLAILKLSNNSFSGRVPPELGDCPSLLWLDLNTNLLTGTIPPELFKQSGKVTVNFINGKTYVYIKNDGSRECHGAGNLLEFAGISQKKLNRISTKNPCNFTRVYGGKLQPTFTTNGSMIFLDISHNMLSGPIPKEIGEMHYLYILHLSYNNLSGSIPQELGTMKNLNILDLSYNKLQGQIPQALAGLSLLTEIDLSNNFLCGMIPESGQFDTFPPVKFQNNSGLCGVPLPPCGKDAGANAAQHQKSHRRQASLAGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKEAAIDGYIDNSHSGNGNNSGWKLTSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKAGIKMNWSVRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARMMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNMEIELLQHLKVACACLDDRPWRRPTIIQVLAMFKEIQAGSGMDSQSTIATEDEGFNAVEMVEMSIKEVPELTKH 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06769 1188 PRINTS Leucine-rich repeat signature 127 140 - -
Mepo3g06769 1188 PRINTS Leucine-rich repeat signature 697 710 - -
Mepo3g06769 1188 Gene3D Ribonuclease Inhibitor 38 766 IPR032675 -
Mepo3g06769 1188 ProSitePatterns Protein kinases ATP-binding region signature. 881 904 IPR017441 GO:0005524
Mepo3g06769 1188 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 645 765 - -
Mepo3g06769 1188 FunFam Serine/threonine-protein kinase BRI1-like 1 590 647 - -
Mepo3g06769 1188 Pfam Brassinosteroid receptor island domain 583 647 IPR045381 -
Mepo3g06769 1188 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 411 595 - -
Mepo3g06769 1188 Gene3D Phosphorylase Kinase; domain 1 836 950 - -
Mepo3g06769 1188 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Mepo3g06769 1188 Pfam Leucine Rich repeat 313 329 IPR001611 GO:0005515
Mepo3g06769 1188 SMART serkin_6 875 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06769 1188 SMART LRR_typ_2 485 509 IPR003591 -
Mepo3g06769 1188 SMART LRR_typ_2 533 557 IPR003591 -
Mepo3g06769 1188 SMART LRR_typ_2 697 720 IPR003591 -
Mepo3g06769 1188 SMART LRR_typ_2 558 581 IPR003591 -
Mepo3g06769 1188 SMART LRR_typ_2 97 120 IPR003591 -
Mepo3g06769 1188 SMART LRR_typ_2 386 410 IPR003591 -
Mepo3g06769 1188 ProSiteProfiles Protein kinase domain profile. 875 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06769 1188 FunFam Brassinosteroid LRR receptor kinase 951 1152 - -
Mepo3g06769 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Mepo3g06769 1188 Pfam Leucine rich repeat N-terminal domain 37 69 IPR013210 -
Mepo3g06769 1188 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 169 410 - -
Mepo3g06769 1188 SUPERFAMILY Protein kinase-like (PK-like) 861 1153 IPR011009 -
Mepo3g06769 1188 Gene3D Transferase(Phosphotransferase) domain 1 951 1152 - -
Mepo3g06769 1188 Gene3D - 588 648 - -
Mepo3g06769 1188 SUPERFAMILY RNI-like 64 350 - -
Mepo3g06769 1188 Pfam Protein kinase domain 875 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06769 1188 CDD STKc_IRAK 881 1150 - -
Mepo3g06769 1188 Pfam Leucine rich repeat 676 732 IPR001611 GO:0005515
Mepo3g06769 1188 Pfam Leucine rich repeat 415 473 IPR001611 GO:0005515
Mepo3g06769 1188 Pfam Leucine rich repeat 511 570 IPR001611 GO:0005515
Mepo3g06769 1188 FunFam serine/threonine-protein kinase BRI1-like 2 836 950 - -
Mepo3g06769 1188 SUPERFAMILY L domain-like 247 755 - -
Mepo3g06769 1188 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 411 1148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06769 Mepo-Chr3 81458181 81462391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06769 26 1184 Receptor kinase-like Gene Family AT4G39400 67.321 0.0 1513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo3g06769 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06769 K13415 - gmx:100799772 1813.12