Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06766 ATGGCTGGAGCCGAATTCTCCATAGGTACACTTTGTTTAATAGTTCTCCTAGCTTATGGTACCCTACAATGTGTCCAAGGGGCAGATTCTATACCAGGTCTTGGTATCAATTGGGGTGCTCTTGCATCACACCCTATGGATCCTAATATTGTTGCAAATATGTTGAGGGACAGTGGAATCAAGAAGGTGAAACTTTTTGATGCAGATCCTTGGATCGTTAGTGCTTTTTCCGGAGATTTTGAAGTCATGGTTGGAATTCCTAATGATCAATTAAGTAAATTTGCTGGAAGTCTTGGAGATTCCGAAGATTGGGTAAAAGAAAATCTCACCAAACATCTTCACAATGGGGGTGTGAATATCAGATACGTAGCAGTTGGAAATGAACCATTCTTGAAAAGCTACGGGGATAAATATGTGAAGAAAACATTTCCAGCTATGCAAAATATTCAAAAGGCTATTGATAAAGCTGGACATGGAGACCAAGTGAAGGTGACGACAGCTTTGAATGCAGATGTTTATGAATCTCAAACAAACAAACCGTCGGATGGAGATTTTCGAGACAACATTCGTGATGTTATGAACCAAATTATCCAATTTCTTCACGAAAAGAAGTCGCCGTTTCTTGTCAACATTTACCCTTTCCTTAGTCTATATCAAAGTGAAGGTTTTCCACAAGATTTTGCATTCTTTGGTACCAATAGCATGACAATTAGAGACAAAAATGCACAATATAGCAATGTCTTTGATGCAAATTTAGATACACTTGCTTGGGCATTAAAAAAGGCTGGTTACTCTGACATAAAAATTGTTGTTGGTGAAATTGGTTGGCCAACTGATGGTAACATAAATGCTAATGTTAACAATGCAAAAAGATTTTACCAAGGGTTTCTTAAAAATATGGCTAGTAAAAAAGGTACTCCAATGCTCCCCGGACATATGGATGCGTATCTATTTTCTCTTTTTGACGAGAATTTAAAGAGTATTGATCCTGGTAATTTTGAACGTCATTGGGGAATTTATCGTTATGATGGAAAGCCGAAGTTTCCTATAGATTTTTCAGGTAAAGGAGAAGAAAAAATGCCACAATCAGCGAAGGGTGTTCGATACCAAGAACATAAATGGTGTGTCCTAAGTGCAGATGTTAAGAATATGTCTTTGATCCCGTCGGCATTAGACTATGCTTGTGCTGGTGCTGACTGTACAAGTTTAGGATATGGTTGTTCTTGTGGAAATTTGGGATTAGCTGGTAATGCATCTTTTGCTTTTAACCAGTTTTTTCAAACTAGAGACCAGAGCGTTGAAGCATGCGATTTCAATGGATTAGGTAGTATTGTTACACAAGATCCATCAAAGGGAACTTGTTTGTTCCCTATAGAACTTGAGAGCAATACTGGAGATATGCTAACAACAATGCGTATTATGGCAAGCATATCTGATGAAGAAGAAAGGGAACGCGAAGCTGAGAATAAGGTGATGGTGGCTGATGAAAACAGAGGAGGTGGTGGTGGTGGCCATTGA 1518 0.386 MAGAEFSIGTLCLIVLLAYGTLQCVQGADSIPGLGINWGALASHPMDPNIVANMLRDSGIKKVKLFDADPWIVSAFSGDFEVMVGIPNDQLSKFAGSLGDSEDWVKENLTKHLHNGGVNIRYVAVGNEPFLKSYGDKYVKKTFPAMQNIQKAIDKAGHGDQVKVTTALNADVYESQTNKPSDGDFRDNIRDVMNQIIQFLHEKKSPFLVNIYPFLSLYQSEGFPQDFAFFGTNSMTIRDKNAQYSNVFDANLDTLAWALKKAGYSDIKIVVGEIGWPTDGNINANVNNAKRFYQGFLKNMASKKGTPMLPGHMDAYLFSLFDENLKSIDPGNFERHWGIYRYDGKPKFPIDFSGKGEEKMPQSAKGVRYQEHKWCVLSADVKNMSLIPSALDYACAGADCTSLGYGCSCGNLGLAGNASFAFNQFFQTRDQSVEACDFNGLGSIVTQDPSKGTCLFPIELESNTGDMLTTMRIMASISDEEEREREAENKVMVADENRGGGGGGH 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06766 505 SUPERFAMILY (Trans)glycosidases 34 352 IPR017853 -
Mepo3g06766 505 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 444 IPR044965 GO:0004553|GO:0005975
Mepo3g06766 505 Pfam X8 domain 373 442 IPR012946 -
Mepo3g06766 505 Gene3D Glycosidases 33 359 - -
Mepo3g06766 505 MobiDBLite consensus disorder prediction 478 493 - -
Mepo3g06766 505 Pfam Glycosyl hydrolases family 17 34 352 IPR000490 GO:0004553|GO:0005975
Mepo3g06766 505 Gene3D - 369 465 - -
Mepo3g06766 505 Coils Coil 477 497 - -
Mepo3g06766 505 ProSitePatterns Glycosyl hydrolases family 17 signature. 267 280 IPR000490 GO:0004553|GO:0005975
Mepo3g06766 505 MobiDBLite consensus disorder prediction 478 505 - -
Mepo3g06766 505 FunFam Glucan endo-1,3-beta-glucosidase 8 369 465 - -
Mepo3g06766 505 FunFam Glucan endo-1,3-beta-glucosidase 5 33 358 - -
Mepo3g06766 505 SMART X8_cls 373 456 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06766 Mepo-Chr3 81406305 81409652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06766 2 466 Miscellaneous Gene Families AT5G64790 50.215 4.42e-174 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06766 - - gmx:100794658 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06766 3 81406305 81409652 Mepo3g06766 3 81406305 81409652 ECH
Mepo4g01012 4 13467078 13475859 Mepo3g06766 3 81406305 81409652 PCT