Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06765 ATGGACATGTATTTTGGAAACCCTAATTCTAACCCTTATCACAATAATAATATATCTCCTCCTCCTCCTCCTTCCTCGTCTGATTTCATTAATTTATCTGATTATCTCGTGCTGGATGATGAACATCAAGAATGTTGGTCACAAAGCACAGGAACTGAATCATCAGACAACAAGCAACCTTCCACCACCATTGATATTAATGTCATCAATCAAGGATTAATTTGTGATGAAATTGAAACCTCTGCCAACAACAACAATAACATGATGAAACGTAAAAGCGGGGAGATGAAGGAAAATACAGTAGATGTGAGCCCAAGAGTGACGTTTAGAACGAGATCGCAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCTGTCAAGAATAGTCCATACCCAAGGAACTACTACAAGTGTTCAGGTGAAGGATGTGGTGTGAAGAAAAGAGTGGAAAGGGATAGGGAAGATTCAAGCTATGTGTTAACAAGCTATGAAGGTGTTCACAATCATGAAAGCCCCTGCAATTCATATTGCACCCCAGTGTCTTTGGTGTATTCCAATGAATGGCCACAGCAGCACCCTTCTGCAACCTCTTCTTCCAATTAA 621 0.401 MDMYFGNPNSNPYHNNNISPPPPPSSSDFINLSDYLVLDDEHQECWSQSTGTESSDNKQPSTTIDINVINQGLICDEIETSANNNNNMMKRKSGEMKENTVDVSPRVTFRTRSQLEIMDDGYKWRKYGKKSVKNSPYPRNYYKCSGEGCGVKKRVERDREDSSYVLTSYEGVHNHESPCNSYCTPVSLVYSNEWPQQHPSATSSSN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06765 206 SUPERFAMILY WRKY DNA-binding domain 110 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g06765 206 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g06765 206 Gene3D WRKY domain 105 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g06765 206 MobiDBLite consensus disorder prediction 1 28 - -
Mepo3g06765 206 FunFam WRKY transcription factor 57 104 178 - -
Mepo3g06765 206 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 195 IPR044810 GO:0003700
Mepo3g06765 206 Pfam WRKY DNA -binding domain 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g06765 206 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06765 Mepo-Chr3 81399408 81401406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06765 98 198 WRKY Transcription Factor Family AT5G64810 60.396 2.19e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g06765 WRKY 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06765 - - mtr:11423676 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06765 3 81399408 81401406 Mepo3g06765 3 81399408 81401406 ECH
Mepo4g00645 4 8750694 8756396 Mepo3g06765 3 81399408 81401406 PCT