Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06762 ATGGAATTGGCCTCAAAGCTCCACCACCTCGACCTCACCGGAGCATTCATTCTCGATTCTCGACGCCTTCCACGCACCCTATCTCACACTCATCTCATCGCCAAACCCAACACCTTCAACACTAACACTAACCCCAATAGATTCTTCACCTCAAAAAAACTCAATCATACCTCCCGTTTATCCGCTGTCGCCGCCGTGGATGAAACTTCAGTAGAAGAAGATGATATTGAGTCACTATTTACCGATACTTCAGCCGATGAACGACGCGGTAACAATAAACAATCTAACACCGGTGCTTCAAGCGTTTCCTCTGGTGTTAAGTTAGAAAATATTAGAAAAACTTACAAAGGTGTTACGGTTTTGAAAGAGGTTAATTGGGAAGTGAAAAAGGGCGAGAAAGTGGGTTTAGTTGGTGTAAATGGTGCGGGGAAGACGACACAGATGAGGATTATTGCGGGTTTGGAGGAACCGGATTCGGGGAACGTGATTAAAGCGAAACCGAATATGAAAATTGCGTTTTTGAGTCAGGAATTTGAGGTTTCGCAGAGTAGGACGGTGAGGGAAGAGTTTATGAGTGCTTTTAAAGAGGAAATGGAGGTTGCGGGGAAATTGGAGAAAGTGCAGAAGGCGCTTGAGAGTTCTGTGAATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTTGATCTGCTTCAGAGACGAGCTCAGGCTGTGAATTTGGACGTCGTTGATTCCAAGATAAGTAAGTTGATGCCTGAGCTTGGTTTTGGTGTAGAGGATTCTGATAGGTTGGTTGCTTCTTTTAGTGGTGGATGGCAGATGAGGATGTGTCTTGGCAAGATTTTACTTCAGGAACCGGATTTGTTGTTGTTAGATGAACCTACAAATCACCTTGATCTTGACACAATTGAGTGGCTTGAAGATTATCTTAACAAGCAGGATGTGCCGATGGTTATCATTTCTCACGACAGAGCTTTTCTCGATCAACTATGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAATTATTCTCAGTATATTCTTTCAAAGGCGACTTGGATTGAAACACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAACAAACAAGAGAGTTGATAAGCAGGTTAGGTGCCGGAGCAAGTTCTGGCCGTGCTTCGACTGCTGAGAAGAAATTGGAAAGACTTCTTGGAGAGGAACTAGTAGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAGGAACTTGGATTTTGGCTTTGAGGATAAAAAACTTTTCAACAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTCTTGGTCCAAATGGATGTGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAATCAGCGGTGAAGTTATCCTTGGGGAGCATAATGTATTGCCTAACTATTTCGAGCAGAATCAGGCTGAGGCACTTGATCTGGAAAAGACGGTGCTTGAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGAGTGACGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTACTTGTTTTGGATGAACCAACGAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAACGAGTACGAGGGCACTGTTATCACCGTATCTCATGATCGGTACTTTATAAAGCAGATAGTTACTAGAGTGATTGAAGTTAAAGATGGCACTGTGCAGGATTATGCTGGAGATTACAGTTATTATTTGGAGAAGAATCTTGATGCCAGGGAAAAAGAGCTTGAACGCCAGGCAGAGCTTGACGACAAAGCTCCTAAATTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCAAGGAAGAAGCAAAAGATGCAGGCCTTTCAGCAAGCAAAACAGAAGTCTAAAGGTGCAAAAAATTCAAAGAGATGGAATTAA 2103 0.4246 MELASKLHHLDLTGAFILDSRRLPRTLSHTHLIAKPNTFNTNTNPNRFFTSKKLNHTSRLSAVAAVDETSVEEDDIESLFTDTSADERRGNNKQSNTGASSVSSGVKLENIRKTYKGVTVLKEVNWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVIKAKPNMKIAFLSQEFEVSQSRTVREEFMSAFKEEMEVAGKLEKVQKALESSVNDLELMGRLLDEFDLLQRRAQAVNLDVVDSKISKLMPELGFGVEDSDRLVASFSGGWQMRMCLGKILLQEPDLLLLDEPTNHLDLDTIEWLEDYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYILSKATWIETQYAAWEKQQKEIEQTRELISRLGAGASSGRASTAEKKLERLLGEELVEKPFERKQMKIRFPVRGSSGRSVVTVRNLDFGFEDKKLFNKANLTIERGEKIAILGPNGCGKSTLLKLIMGLEKPISGEVILGEHNVLPNYFEQNQAEALDLEKTVLETVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYEGTVITVSHDRYFIKQIVTRVIEVKDGTVQDYAGDYSYYLEKNLDAREKELERQAELDDKAPKLKAKSKMSKAEKEARKKQKMQAFQQAKQKSKGAKNSKRWN 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06762 700 Gene3D - 397 663 IPR027417 -
Mepo3g06762 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 638 IPR027417 -
Mepo3g06762 700 Gene3D - 103 387 IPR027417 -
Mepo3g06762 700 Pfam ABC transporter 335 422 IPR032781 -
Mepo3g06762 700 MobiDBLite consensus disorder prediction 79 103 - -
Mepo3g06762 700 Coils Coil 660 689 - -
Mepo3g06762 700 ProSitePatterns ABC transporters family signature. 268 282 IPR017871 GO:0005524|GO:0016887
Mepo3g06762 700 SMART AAA_5 457 625 IPR003593 GO:0016887
Mepo3g06762 700 SMART AAA_5 130 345 IPR003593 GO:0016887
Mepo3g06762 700 FunFam Putative ABC transporter ATP-binding component 106 391 - -
Mepo3g06762 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 341 IPR027417 -
Mepo3g06762 700 CDD ABCF_EF-3 433 625 - -
Mepo3g06762 700 MobiDBLite consensus disorder prediction 648 680 - -
Mepo3g06762 700 FunFam ABC transporter ATP-binding protein 393 660 - -
Mepo3g06762 700 MobiDBLite consensus disorder prediction 648 700 - -
Mepo3g06762 700 Pfam ABC transporter 449 580 IPR003439 GO:0005524
Mepo3g06762 700 ProSitePatterns ABC transporters family signature. 552 566 IPR017871 GO:0005524|GO:0016887
Mepo3g06762 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 364 IPR003439 GO:0005524
Mepo3g06762 700 Pfam ABC transporter 121 296 IPR003439 GO:0005524
Mepo3g06762 700 CDD ABCF_EF-3 106 336 - -
Mepo3g06762 700 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 105 692 - -
Mepo3g06762 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 433 648 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06762 Mepo-Chr3 81372854 81378547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06762 430 650 Calmodulin-binding Proteins AT2G36910 27.016 6.59e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06762 - - gmx:100796907 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06762 3 81372854 81378547 Mepo3g06762 3 81372854 81378547 ECH