Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06745 ATGTCCAGAGAAAGAGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGAGAAGGAGATCATGATGTTTCAAATTCATCAAATCAGATGGGAAGAAGACATATGTTAGGTCCACCAGGAACCCTAAATACTATAACCCCTTGTGCAGCATGTAAGCTATTAAGAAGAAGATGTGCTCAAGAGTGTCCCTTTTCTCCCTATTTCTCTCCTCATGAACCCCAGAAGTTTGCTTCTGTTCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAAATGCTTATGGAGGTAGCAGAATGTTCAAGAGCAGATGCAGCAAATAGTCTTGTTTATGAAGCAAATGTGAGGCTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCTGCATTGCAACAACAGGTTCAATCTTTACAAGCAGAACTTAATCTATTAAGAGGTGAAATACTTAAATACAAATTAAGGGAAGCTGCTAACATCAACATGAATATGAATATGAATATGAATATGAATATGAATATGAATAATATGATACCTTCTTCTCATCAACTTGCAATGCTCCCTTCTAATTCCTCTGTGGCTGTTTCTATTGCTGCTCCACCGCCGCCGCCGCCTCCACCTCCTCTTCCTTCTACAACTTCTAATTCCTCTTCTTCCATATACTTTCAACAGAGGGATCCCAACTATAGTACAATTTCAAGTGATGATAATATTTCCTATTTTGGTTAA 723 0.3859 MSRERERFDEIGKKIKREGDHDVSNSSNQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVAECSRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNLLRGEILKYKLREAANINMNMNMNMNMNMNMNNMIPSSHQLAMLPSNSSVAVSIAAPPPPPPPPPLPSTTSNSSSSIYFQQRDPNYSTISSDDNISYFG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06745 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 43 177 - -
Mepo3g06745 240 MobiDBLite consensus disorder prediction 211 240 - -
Mepo3g06745 240 MobiDBLite consensus disorder prediction 1 38 - -
Mepo3g06745 240 Coils Coil 126 153 - -
Mepo3g06745 240 Pfam Lateral organ boundaries (LOB) domain 47 143 IPR004883 -
Mepo3g06745 240 MobiDBLite consensus disorder prediction 1 23 - -
Mepo3g06745 240 ProSiteProfiles LOB domain profile. 46 147 IPR004883 -
Mepo3g06745 240 MobiDBLite consensus disorder prediction 193 240 - -
Mepo3g06745 240 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06745 Mepo-Chr3 81198442 81199727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06745 5 183 AS2 family AT2G30340 61.957 1.12e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g06745 LOB 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06745 - - gmx:100790799 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06745 3 81198442 81199727 Mepo3g06745 3 81198442 81199727 ECH
Mepo3g06352 3 77605816 77610129 Mepo3g06745 3 81198442 81199727 ECH