Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06742 ATGGCACCAAAAACCAGAAGCGCAAGAGTGAGCCGTAACCCTGAATTGATCAGGGGTATCGGAAAATACTCGAGATCTGCTATGTACCACAAACGTGGTCTATGGGCTATCAAGGCTAAGCACGGCGGAGCTTTCCCTCGACATGATCCCGCCGCTAAGCCTGCAGCTCCGGCCGAGAAGCCACCTAAGTTTTATCCCGCCGACGATATCAAGAAGCCACTCCGCAACAAGCACAAGCCAAAGCCCACTAAGCTCAGGGCTTCCATTACTCCTGGTACAGTGTTGATTCTTCTTGCTGGAAGATTTAAGGGAAAGAGAGTTGTGTTTCTCAAGCAGCTTCCTTCCGGACTTCTTCTCGTTACCGGTCCATTCAAGATTAACGGAGTCCCCTTGAGACGTGTGAATCAAGCTTATGTTATCGGCACATCTACCAAAGTAGATATTTCTTTGGTTAATGTCGACAAGTTTGATGACAAGTACTTCTCAAAGGAATCCCAGAAAAAGACTAAGAAGGGAGAGAGCGAGTTCTTTGAGGCAGATAAGGAGGACAAAAAGGTGCTCCCTCAGGAGAAGAAAGATGATCAAAAGACTGTCGATGCTGGTTTGTTAAAAGCCATTGACAGTGTTCCAGACTTGAAGACTTACCTAGGTGCCAGGTTTTCCTTGAAGGCAGGTGTGAAGCCACACGAATTGGTCTTCTAG 702 0.4729 MAPKTRSARVSRNPELIRGIGKYSRSAMYHKRGLWAIKAKHGGAFPRHDPAAKPAAPAEKPPKFYPADDIKKPLRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISLVNVDKFDDKYFSKESQKKTKKGESEFFEADKEDKKVLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06742 233 SUPERFAMILY Translation proteins SH3-like domain 87 176 IPR008991 -
Mepo3g06742 233 CDD KOW_RPL6 81 233 IPR041997 -
Mepo3g06742 233 MobiDBLite consensus disorder prediction 46 85 - -
Mepo3g06742 233 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Mepo3g06742 233 Gene3D - 87 171 IPR014722 -
Mepo3g06742 233 PANTHER 60S RIBOSOMAL PROTEIN L6 7 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mepo3g06742 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mepo3g06742 233 FunFam 60S ribosomal protein L6 87 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06742 Mepo-Chr3 81159038 81163055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06742 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 78.541 4.68e-120 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06742 K02934 - pvy:116113922 401.749