Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06738 ATGGGAAGTGTAAGTAACATTGGTTTCTCTTCAACATTCAGAGCTTCTTTGGACACAAAACTACTTTCAAAGCAGAGGAAACAAAAATCGCCATGCAGTTTTATGGTTCCTATCAACTACTCTATTAGGATGAACAAAATTTGTTGTACACTATCAGAAAGTGGGATTGAAGAGAATCCTACCAGCAAAAGGGTATCTAAATCTAATGATTTAATGGAAGAATACAATATAGCTATGAAGAAGATGATGAGGAACCCTTATGAGTATCATCACGATCTGGGTATGAATTATACAGTTATAACTGACAATTTGATTGTGGGGTCCCAACCACAGAAACCTGAAGATGTAGATCACCTTAAGAAGGAAGAAGGTGTGGCATATATTCTAAACTTGCAACAGGATAAGGATGCTGAATTTTGGGGAATAGACTTGCAGTCAATAGTAAAAAAGTGTCGCGAACTTGAAATTAGACACATGAGGAGACCTGCAGTAGACTTTGATCCAAACTCTTTGCGAAGTGCACTACCTAAAGCAGTGTCATCCTTAGAATGGGCAATTTCTGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCAGGACTTGGAAGAGCTCCAGCAGTGACAATTGCTTATTTGTTCTGGTTTTGTGACATGAATCTAAATGAAGCCTATGATATGCTAACTTCAAAGAGACCTTGTGGACCAAATAAAAGAGCAATACAAGGAGCTACTTATGATTTGGCTAAAAATGATCCATGGAAGGAGCCATTTGAGAGTCTTCCAGACCATGCTTTTGGGGATATAGCAGATTGGGAGAGGAACCTGATTCAAAACCGTGTCCGCGCTCTTCGTGGAACCTGA 861 0.3937 MGSVSNIGFSSTFRASLDTKLLSKQRKQKSPCSFMVPINYSIRMNKICCTLSESGIEENPTSKRVSKSNDLMEEYNIAMKKMMRNPYEYHHDLGMNYTVITDNLIVGSQPQKPEDVDHLKKEEGVAYILNLQQDKDAEFWGIDLQSIVKKCRELEIRHMRRPAVDFDPNSLRSALPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVTIAYLFWFCDMNLNEAYDMLTSKRPCGPNKRAIQGATYDLAKNDPWKEPFESLPDHAFGDIADWERNLIQNRVRALRGT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06738 286 ProSiteProfiles Dual specificity protein phosphatase domain profile. 96 253 IPR020422 GO:0006470|GO:0008138
Mepo3g06738 286 SMART dsp_5 96 246 IPR020422 GO:0006470|GO:0008138
Mepo3g06738 286 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 232 IPR000387 GO:0016311|GO:0016791
Mepo3g06738 286 CDD DSP_laforin-like 95 242 IPR045204 GO:0019203
Mepo3g06738 286 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 79 286 - -
Mepo3g06738 286 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 238 IPR029021 -
Mepo3g06738 286 Pfam Dual specificity phosphatase, catalytic domain 117 236 IPR000340 GO:0008138|GO:0016311
Mepo3g06738 286 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 24 254 - -
Mepo3g06738 286 Gene3D Protein tyrosine phosphatase superfamily 79 286 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06738 Mepo-Chr3 81102134 81105675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06738 58 286 Protein tyrosine phosphatase (PTP) family AT3G10940 79.565 2.89e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06738 - - gmx:100805592 485.723