LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g06737	ATGATATCTACCACGCACCAGAATCACAATCTGCGCCACACAACATCTAATACAAGACCTGCAACACAAATAACCCAACAAAACCTGTTGAACAGACCATCAAAGGATATGCACTATTGTAAAACTGACCCTATAATCAATGAAAATAATGTAAGCAATGGCCCTCTTCCTGAAGAACTCACCAGACTTCCATTTCTTGAGCAGCTCAACCTTGGTTGGAGCTATTTCAATGGCACAATCCTAGCAAGTTATGGAAACTTTGAAATACTCAAGTTCCTAAATTTAGCTGGTAATGCATTGGAAGGTTCTGTACCACCTGAACTAGGGTTATTATCAGAGTTGCAACATTTGGAAATTGGATACAACACATTTTCAGGAACACTACCAGTGGAATTAACGATGTTGTCTAATCTCAAATACTTAGACATTTCATCATCCAATATTTCTGGTCAAGTGATTCCTGAGCTAGGAAACTTAACCATGCTTGAAGAGTTGTATATCTTTGAGAATCGCTTAAGCGGCGAAATCCCATCAAGCATAGGCCAGTTGACATCACTGCAATGTCTTGATTTATCGGAAAATGAACTAACTGGTTCAATTCCATCAGAAATAACACTGCTGAAGGAATTAAGAAGGATGGATCTCATGCTAAACAAGCTAAAAGGTGAAATTCCTCAAGGAATTGGTGAGCTTCCAAAACTCAACACTTTCCAAGTTTTCAACAATTTTCTCATTGGTACACTACCCCCGAAACTCGGTTCCAACGGGTTGCTACAAACAATAGATGTTTCCACAAACCTACTCCAAGGCTCAACCCCCATCAACATTTGCAAAGGAAATAATTTGGTTTCGTTCATTCTCTTCAACAACAACTTCACCAATACTCTTCCATTGTCACTCAACAACTGTACCTCACTCACTAGGGTTCGAATCCAAAACAACAAACTCAACGGGTCAATTCCACAAACCCTTACCATGCTTCCTAAATTAACATTCCTCGATCTAAGCAACAACAATTTCAATGGCAAAATTCCACAAAAACAGGATACAGTCAGTACTATAATGAGGAGAGGGGTTTTGGCTGAAGTGGGTGTATTGGGAGGAAACGTGAGACACAGAAACATTGTGAGATTGTTAGGGTGTTGTAGTAACAAGGAGAAGACAATGTTGCTTTACAATTACATGGAAAATGGCAACCTTGATGAGTTTTTGCATGCAGAGAATAATGAGGATAACATGGTAAATGCGTCTGACTGGGTTACTAGGTATAAGATAGCCTTAGGTGTGGCACATGGAATCAGTTATCTTCATCATGACTGCAATCCTGTGGTTGTTCACAGGGATATCAAACCTCGCAACATTTTATTGGACGGTCAGATGGAAGCGAAAGTAGCTGATTTTGGTATTGCCAAGTTAATTCAAATAGATGAGCTTGAGTCTACGATTATTGGTACCCATGGTTACATCGCTCCAGAAAATGCTGAAAGACTCCAAGTTGATGAGAAAACTGATATTTACAGCTACGGAGTGGTTTTAATGGAACTTATAAGTGGAAAACGTGCATTGAATGAAGAATTTGGTGAAGGTGAGAACATTGTGGATTGGGTTGATTCCAAACTAAAGACTGAAGATGGAATTGATGGTATATTGGACAAGAATGCTGGGGCAGATCGTGATTCAGTGAAGAAAGAAATGACAAACATGCTTAGAATCGCATTGCTTTGCACAAGCAGACATCGAGCCGATAGGCCTTCAAAGAGAGATGTTCTCTCAATGCTTCAAAAGGATCAACCTGGGAGGGAATTGAATGATATTGATATATATAATTTTGATGTAGGTGAAGGTAGTGGTGACGGACAGACCTAG	1866	0.396	MISTTHQNHNLRHTTSNTRPATQITQQNLLNRPSKDMHYCKTDPIINENNVSNGPLPEELTRLPFLEQLNLGWSYFNGTILASYGNFEILKFLNLAGNALEGSVPPELGLLSELQHLEIGYNTFSGTLPVELTMLSNLKYLDISSSNISGQVIPELGNLTMLEELYIFENRLSGEIPSSIGQLTSLQCLDLSENELTGSIPSEITLLKELRRMDLMLNKLKGEIPQGIGELPKLNTFQVFNNFLIGTLPPKLGSNGLLQTIDVSTNLLQGSTPINICKGNNLVSFILFNNNFTNTLPLSLNNCTSLTRVRIQNNKLNGSIPQTLTMLPKLTFLDLSNNNFNGKIPQKQDTVSTIMRRGVLAEVGVLGGNVRHRNIVRLLGCCSNKEKTMLLYNYMENGNLDEFLHAENNEDNMVNASDWVTRYKIALGVAHGISYLHHDCNPVVVHRDIKPRNILLDGQMEAKVADFGIAKLIQIDELESTIIGTHGYIAPENAERLQVDEKTDIYSYGVVLMELISGKRALNEEFGEGENIVDWVDSKLKTEDGIDGILDKNAGADRDSVKKEMTNMLRIALLCTSRHRADRPSKRDVLSMLQKDQPGRELNDIDIYNFDVGEGSGDGQT	621

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g06737	621	FunFam	Leucine-rich repeat receptor-like protein kinase	395	606	-	-
	Mepo3g06737	621	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	275	356	-	-
	Mepo3g06737	621	ProSiteProfiles	Leucine-rich repeat profile.	185	207	IPR001611	GO:0005515
	Mepo3g06737	621	MobiDBLite	consensus disorder prediction	1	23	-	-
	Mepo3g06737	621	Pfam	Protein kinase domain	346	586	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g06737	621	Gene3D	Ribonuclease Inhibitor	43	350	IPR032675	-
	Mepo3g06737	621	FunFam	Leucine-rich repeat receptor protein kinase EMS1	80	175	-	-
	Mepo3g06737	621	FunFam	Leucine-rich repeat receptor-like protein kinase PXL1	180	274	-	-
	Mepo3g06737	621	SMART	serkin_6	350	593	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g06737	621	ProSiteProfiles	Protein kinase domain profile.	306	600	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g06737	621	Gene3D	Transferase(Phosphotransferase) domain 1	395	608	-	-
	Mepo3g06737	621	SUPERFAMILY	RNI-like	48	343	-	-
	Mepo3g06737	621	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	444	456	IPR008271	GO:0004672\|GO:0006468
	Mepo3g06737	621	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	50	151	-	-
	Mepo3g06737	621	PRINTS	Leucine-rich repeat signature	327	340	-	-
	Mepo3g06737	621	PRINTS	Leucine-rich repeat signature	186	199	-	-
	Mepo3g06737	621	Gene3D	Phosphorylase Kinase; domain 1	351	394	-	-
	Mepo3g06737	621	SUPERFAMILY	Protein kinase-like (PK-like)	352	597	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g06737	Mepo-Chr3	81064416	81067373	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g06737	46	593	Receptor kinase-like Gene Family	AT1G75820	34.733	2.65e-89	296

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Mepo3g06737		Pkinase	4.9e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g06737	-		-	mtr:112421099	465.692