Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06715 ATGTCGTCGTTCCCGTTCCACCGTCGATCTCAATCGGAGGTACATTTCCGAATCCCCGATGATTTCGACCTCGAAATGGATCCCTTCGACTTCGACGCTTCTCCGCTCCAGTTCCAAGATCCACCACCACCGCAACAACACGACGATCTCCTTTCCTCTTACATCGATTCCGATAATTCCGGATCCAAACTCAATTCTCCAACCGCCGCTAATGCCGGTCACCGCCGTAGCAATTCCGCTGATACATCTTCTTCCTTGTTGTCTGAAGGAATCGAATCTAAGAAAGCTATGTCTCCTGATAAACTTGCTCAATTGTGGACCGTTGATCCTAAACGCGCCAAGAGGATTCTCGCAAATCGTCAATCTGCGGCGAGGTCGAAAGAGAGGAAAGCTTGTTATGTGGTTGAACTTGAAAGGAAAATTCATACTCTTCAAACTGAAGCAACTACTCTTTCTGCTCAGTTAAATCTTTTCCAGAGAGATACAACTGGTCTGTCGAGTGAAAATACCGAGTTGAAGCTTCGGTTACAAACCATGGAGCAACAAGCTAAGCTATGTGATGCTCTAAATGAAGCATTGAAGAACGAAGTTGATAGGCTCAAGCTTGCTACTGGAGAGGTACCAACCCATGCTGATACCTATGGTTTGGGAATGCATCAACTTTCATATTCTCAAGCTTCATCCTTCATGCACCAGCCACAACATGGTTCAAACGAACTTAGGGCCATGCAAATGCAGCATTTTCATTCACTCTCATCTAATGGATCCAATCCCCACCAGCCTCAGTTTGATCTACCCACTTCATATGATTTGTCAGAAATGTTGTCAAGTGATTCTATCGGCCAATTTCAGGGGCTGGACATTGGCAACAGGGTTTCTCATGTTCTGATGCCTGATGGTCCCTCCGTTTCTGTTAATAAAACCAACAACGCCTTTTGA 939 0.4547 MSSFPFHRRSQSEVHFRIPDDFDLEMDPFDFDASPLQFQDPPPPQQHDDLLSSYIDSDNSGSKLNSPTAANAGHRRSNSADTSSSLLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEATTLSAQLNLFQRDTTGLSSENTELKLRLQTMEQQAKLCDALNEALKNEVDRLKLATGEVPTHADTYGLGMHQLSYSQASSFMHQPQHGSNELRAMQMQHFHSLSSNGSNPHQPQFDLPTSYDLSEMLSSDSIGQFQGLDIGNRVSHVLMPDGPSVSVNKTNNAF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06715 312 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Mepo3g06715 312 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 253 - -
Mepo3g06715 312 Coils Coil 176 196 - -
Mepo3g06715 312 Gene3D - 110 184 - -
Mepo3g06715 312 SUPERFAMILY Leucine zipper domain 111 165 IPR046347 GO:0003700|GO:0006355
Mepo3g06715 312 CDD bZIP_plant_RF2 112 161 IPR044759 GO:0003700|GO:0006355
Mepo3g06715 312 MobiDBLite consensus disorder prediction 26 86 - -
Mepo3g06715 312 Pfam bZIP transcription factor 111 169 IPR004827 GO:0003700|GO:0006355
Mepo3g06715 312 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 172 IPR004827 GO:0003700|GO:0006355
Mepo3g06715 312 Coils Coil 134 154 - -
Mepo3g06715 312 FunFam probable transcription factor PosF21 110 163 - -
Mepo3g06715 312 MobiDBLite consensus disorder prediction 50 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06715 Mepo-Chr3 80912181 80915563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06715 5 288 bZIP Transcription Factor Family AT2G40620 51.057 6.20e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g06715 bZIP_1 2.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06715 - - aprc:113852914 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06715 3 80912181 80915563 Mepo3g06715 3 80912181 80915563 ECH