Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06710 ATGAGTGTTATTAGAGTTTATCTTTTATGTTTGTTCTTCCTGTTTCTGGTGACTGTGACAACAGTGACAGCTGTGAATCCTTCTTTAAACGACGACGTTTTGGGGTTGATAGTGTTCAAAGCAGATATAAAAGATCCAAAGGGAAAGTTAACATCTTGGAATGAAGATGATGAAAGTGCTTGTGGTGGTAGTTGGGTTGGTGTGAAATGTAACCCTAGATCTAATAGAGTTGTTGAGGTTAATCTTAATGGGTTCTCTTTATCTGGAAGAATTGGTCGTGGTTTGCAACGTTTGCAGTTTCTTCGTCGGCTTTATTTGGCTAATAATAATCTTACTGGGAGTATAAATGCAAATATTGCTACTATTGATAACCTTAGGGTTCTTGATTTGAGTAATAATAATCTTTCTGGGGTTGTTCCTGATGATTTTTTCAGACAATGTGGGTCTATGAGAGTTGTTTCTTTGGCTAGGAACAGGTTTTCTGGGAATGTTCCTTCTAGTTTAAGTTCATGTGCAGCTATTGCTACTATTGATTTGTCTTTTAACCAGTTTTCGGGGAATGTTCCAAAGGGGATTTGGAGTTTGAGTGGACTTAGGTCTCTTGATTTGTCTGATAATTTGTTGGAAGGTGAGGTTCCGGAAGGTGTTGAAGCGATGAAGAATTTGCGGAGCATTAACTTGGCGAGGAATAGTTTTTCTGGGAAGATACCAGATGGGTTTGGAAGTTGCTTGCTTTTGAGGTCTATTGATTTTGGTGATAATTCTTTCTCTGGTAGTGTACCTAGTGATTTGAAGGAATTGGTGCTGTGTGGTTACTTTAGTTTGCGTGCTAACGCTTTCTCTGGAGATGTTCCGGACTGGATTGGAGAAATGAAGGGTCTTCAGTCATTGGATCTTTCTCAGAATAGATTCTCTGGTTTGGTACCAAACAGTTTAGGCAATATTTGGTCATTGAAAACGTTGAATCTTTCAGGAAATGGTTTCACTGGTAATCTTCCTGAGTCTATGGCAAATTGCACAAACCTCTTGGCCTTGGATGTTAGCCAGAATTCATTGTCTGGCAATCTTCCATCGTGGATTTTCAGGTCGGATTTGGAGAAGGTTATGGTGGTTAAAAACAGAATGAGTGGTAGGGCGAAAAGCCCTTTGTATTCCTTGACTGAAGCTTCTGTTCAGAGTTTTCAAGTTTTGGATTTATCTCACAATGCATTTTCTGGTGAAATTACTTCTGCTCTTTCGGGTTTAAGCAGCTTGCAGGTTTTAAATTTATCATATAACTCTCTTGGAGGTCATATTCCGGCTGCAATCAGTGATTTGAAAACGTGTTCTAGTCTTGATTTGAGTTATAATAAGCTAAATGGAAGCATACCTTCGGAAATTGGTGGAGCTGTTTCCTTGAAAGAACTGAGTTTGGAAAACAATTTCCTTATTGGGAAAATTCCAATCTCAATTGAGAACTGCTCTTCATTAAAAACTTTGATTCTGTCGAAGAACAAGCTGAGTGGGTCGATACCTTCAGCAGTTGCAAGTCTCACCAACCTGAAAACTGTAGACTTGTCATTCAACAACCTTACTGGAGACCTTCCCAAGCAATTGGCTAACCTTCCCAATCTCATAACCTTCAATTTATCTCACAACAACCTTAAGGGTGAACTACCGGCTGGTGGTTTCTTCAACACCATTTCACCTTCGTCTGTTTCTGGTAATCCATTTATTTGTGGCTCTGTTGTGAACAAAAAATGCCCTGTTAAACTCCCAAAGCCTATTGTTCTGAATCCCACCAACTTTTCTCCTGACTCTGACCCTGGATCACCTACTCCAACATTGGGTCATAAGAGAAATATCCTCAGCATTTCAGCACTCATTGCCATTGGTGCAGCTGCTTTCATTGTTATTGGTGTCATTGGCATAACTGTTCTCAACCTCCGTGTTCGGTCCACCACATCTCGATCTCCAGCTGCTCTTGCTTTTTCTGCAGGGGATGAGTACAGCCGCTCGCCAACCACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAACCTGACTTCAGCTCTGGTGCTCACGCTTTGCTTAACAAGGATTGCGAGCTTGGGCGTGGAGGATTTGGGGCTGTCTATCAAACAGTTCTAGGAGACGGGCGTTCAGTTGCAATAAAGAAGCTCACCGTGTCAAGCCTTGTCAAGTCTCAAGAAGATTTCGAGAGGGAAGTGAAGAAACTAGGGAAAGTCAGACACCAAAATCTCGTCGAACTCGAAGGCTATTATTGGACTTCATCACTACAACTCCTCATATATGAGTTTGTCTCCCGCGGCAGCCTTTACAAGCATCTCCACGAAGGATCAGGCGAAAGCTTCCTTTCTTGGAATGAGAGGTTTAACGTCATTCTCGGTACCGCAAAGGCCTTGTCTCACTTGCACCACTCCAACATTATTCACTACAATATTAAGTCAACCAACATTCTTATCGACAGCTATGGTGAACCTAAAGTAGGAGATTACGGCCTAGCAAGACTACTACCAATGCTCGACCGCTACGTCTTAAGCAGCAAAATTCAGAGTGCACTCGGCTACATGGCACCGGAGTTTGCCTGCAAAACAGTGAAAATTACGGAGAAATGCGATGTTTATGGATTCGGAGTCTTGGTTTTGGAGACTGTGACTGGGAAGAGGCCTGTAGAGTATATGGAGGATGATGTGGTTGTGCTTTGTGACATGGTTAGAGGAGCATTGGATGAAGGGAGGGTAGAGGAATGCATTGATGAAAGACTACAAGGGAAGTTCCCAGTAGAAGAAGTAATTCCTGTGATTAAGCTTGGTTTGGTATGTACTTCACAAGTACCGTCTAATAGGCCAGAAATGGGTGAAGTAGTTACCATATTGGAGCTTATAAGATGCCCCTCAGGCTCAGAAGGACAAGAAGAGTTGTCAGGATGA 2940 0.4211 MSVIRVYLLCLFFLFLVTVTTVTAVNPSLNDDVLGLIVFKADIKDPKGKLTSWNEDDESACGGSWVGVKCNPRSNRVVEVNLNGFSLSGRIGRGLQRLQFLRRLYLANNNLTGSINANIATIDNLRVLDLSNNNLSGVVPDDFFRQCGSMRVVSLARNRFSGNVPSSLSSCAAIATIDLSFNQFSGNVPKGIWSLSGLRSLDLSDNLLEGEVPEGVEAMKNLRSINLARNSFSGKIPDGFGSCLLLRSIDFGDNSFSGSVPSDLKELVLCGYFSLRANAFSGDVPDWIGEMKGLQSLDLSQNRFSGLVPNSLGNIWSLKTLNLSGNGFTGNLPESMANCTNLLALDVSQNSLSGNLPSWIFRSDLEKVMVVKNRMSGRAKSPLYSLTEASVQSFQVLDLSHNAFSGEITSALSGLSSLQVLNLSYNSLGGHIPAAISDLKTCSSLDLSYNKLNGSIPSEIGGAVSLKELSLENNFLIGKIPISIENCSSLKTLILSKNKLSGSIPSAVASLTNLKTVDLSFNNLTGDLPKQLANLPNLITFNLSHNNLKGELPAGGFFNTISPSSVSGNPFICGSVVNKKCPVKLPKPIVLNPTNFSPDSDPGSPTPTLGHKRNILSISALIAIGAAAFIVIGVIGITVLNLRVRSTTSRSPAALAFSAGDEYSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLGDGRSVAIKKLTVSSLVKSQEDFEREVKKLGKVRHQNLVELEGYYWTSSLQLLIYEFVSRGSLYKHLHEGSGESFLSWNERFNVILGTAKALSHLHHSNIIHYNIKSTNILIDSYGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLETVTGKRPVEYMEDDVVVLCDMVRGALDEGRVEECIDERLQGKFPVEEVIPVIKLGLVCTSQVPSNRPEMGEVVTILELIRCPSGSEGQEELSG 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06710 979 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 687 769 - -
Mepo3g06710 979 Gene3D Transferase(Phosphotransferase) domain 1 770 975 - -
Mepo3g06710 979 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 332 965 - -
Mepo3g06710 979 ProSiteProfiles Protein kinase domain profile. 693 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06710 979 Pfam Protein kinase domain 696 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06710 979 ProSiteProfiles Leucine-rich repeat profile. 124 145 IPR001611 GO:0005515
Mepo3g06710 979 CDD STKc_IRAK 699 965 - -
Mepo3g06710 979 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 770 971 - -
Mepo3g06710 979 SMART LRR_typ_2 291 314 IPR003591 -
Mepo3g06710 979 SMART LRR_typ_2 535 559 IPR003591 -
Mepo3g06710 979 SMART LRR_typ_2 511 534 IPR003591 -
Mepo3g06710 979 SMART LRR_typ_2 415 439 IPR003591 -
Mepo3g06710 979 SMART LRR_typ_2 219 243 IPR003591 -
Mepo3g06710 979 SMART LRR_typ_2 122 145 IPR003591 -
Mepo3g06710 979 SMART LRR_typ_2 195 218 IPR003591 -
Mepo3g06710 979 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Mepo3g06710 979 Pfam Leucine rich repeat 395 452 IPR001611 GO:0005515
Mepo3g06710 979 Pfam Leucine rich repeat 465 524 IPR001611 GO:0005515
Mepo3g06710 979 Pfam Leucine rich repeat 274 327 IPR001611 GO:0005515
Mepo3g06710 979 Gene3D Ribonuclease Inhibitor 293 584 IPR032675 -
Mepo3g06710 979 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Mepo3g06710 979 Gene3D Ribonuclease Inhibitor 190 287 IPR032675 -
Mepo3g06710 979 Gene3D Phosphorylase Kinase; domain 1 687 769 - -
Mepo3g06710 979 SUPERFAMILY L domain-like 62 387 - -
Mepo3g06710 979 Pfam Leucine Rich Repeat 221 243 IPR001611 GO:0005515
Mepo3g06710 979 Pfam Leucine Rich Repeat 124 143 IPR001611 GO:0005515
Mepo3g06710 979 SUPERFAMILY L domain-like 274 565 - -
Mepo3g06710 979 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Mepo3g06710 979 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 30 310 - -
Mepo3g06710 979 PRINTS Leucine-rich repeat signature 125 138 - -
Mepo3g06710 979 PRINTS Leucine-rich repeat signature 415 428 - -
Mepo3g06710 979 SUPERFAMILY Protein kinase-like (PK-like) 696 965 IPR011009 -
Mepo3g06710 979 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 311 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06710 Mepo-Chr3 80866931 80871606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06710 6 974 Receptor kinase-like Gene Family AT3G56370 67.146 0.0 1264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mepo3g06710 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06710 - - mtr:25489825 1796.56