Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06707 ATGGCTTCTGATTCTTCTTCTTCAAAGTGGGTGATGGAAAATGGTGACATTCCTCATGTTCTGGCTGTTGATGACAATATCATTGATCGCACACTTGTTGAGAAACTCCTTAAGAATTCCTCTTGCAAAGTTACAACTGCTGAAAATGGGCTGAAGGCATTGGAGTATTTGGGCTTGTCAAGTGGTGACCAGAACACTTTGGAGAATGGAGGACCCAAAGTGAATTTAGTCATCACTGACTATTGCATGCCAGGGATGACAGGCTATGAGTTGCTTAAGAAAATTAAGCAATCATCTGTAATGAAGGAGGTTCCTGTTGTGATCATGTCATCTGATAATATACCAACAAGGATCAACAAGTGTATGGAAGAAGGGGCTCAGATGTTCATATTGAAGCCTCTCAAACAATCTGATGTGAAACAACTGACAGGCCAGCTGATGAATTTGGGAAGGCTCCAAAAGAATTGA 468 0.4124 MASDSSSSKWVMENGDIPHVLAVDDNIIDRTLVEKLLKNSSCKVTTAENGLKALEYLGLSSGDQNTLENGGPKVNLVITDYCMPGMTGYELLKKIKQSSVMKEVPVVIMSSDNIPTRINKCMEEGAQMFILKPLKQSDVKQLTGQLMNLGRLQKN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06707 155 ProSiteProfiles Response regulatory domain profile. 19 147 IPR001789 GO:0000160
Mepo3g06707 155 CDD REC_typeA_ARR 20 142 - -
Mepo3g06707 155 Gene3D - 19 155 - -
Mepo3g06707 155 Pfam Response regulator receiver domain 20 141 IPR001789 GO:0000160
Mepo3g06707 155 SUPERFAMILY CheY-like 18 154 IPR011006 -
Mepo3g06707 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 144 IPR045279 GO:0009736
Mepo3g06707 155 SMART REC_2 18 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06707 Mepo-Chr3 80831560 80833231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06707 19 148 Response Regulator Gene Family AT3G56380 70.992 1.86e-61 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g06707 Response_reg 5e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06707 K14492 - gmx:100499827 241.506