Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06706 ATGAGTGTTATTTTACCTGAAACTGTCTCTGCCAAGAAAAAGAAGCTACTCATAAAAGAGCTTCTTCAGGGTAAAGAATATGCTACTAAGCTAAAACTTTTGCTTAAGAATCCTGTTGATTCTGATGGGTCTCCTTCTGTTAAGGAATTAGTGGCTAATGTGTTGAGATCTTTCTCTGAGACTATTTCTGTGATGAATTCTACTGAAGATTGTAGTTTAGATGAGGTTGCTCAGAATCATGTGAATAATTCAGATGGTTCATTGGTGGAAGCTTCATGTAATGATGATTTGAAGTCTGAAGATACAAGTGAGTGTAAGAAGAGATTGTCGCCAACTACAAAGGATCGAAGAGGTTCCTACAAAAGAAGGAAGACAGATGAGACAAGGACCATTGTCTCTAAAACAATTGGTGACACTCATTCCTGGAGAAAGTACGGTCAGAAGGAAATCCTCAATTCTAATTTCCCAAGGAGCTACTTCAGGTGCACCCGGAAGCATGACCAAGGCTGCAAAGCAACCAAACAGGTACAATTGATAGAAGACAATCCAGAAATGTACCAAATTACATACATTGGCTTTCACACATGCAAATCCACCCTGCAAACTCCACAAATGGTCTCATTCTCTGAAGATACTAATTGGGATTCAATTCTTGTGAATTCTAATCCTCACTCAAAGGAGGTTCTAACAAATTATGATCAACAAGATTCACATGTTATTAGCTCAGAAAGGTCAATTGTGAAACAAGAATATCCCAACAATGACGACAGTACTACTCCAAGAAGTGATGTTACTGACAACTTATTGGATCTTAATTTGTGGTCTGATTTTAAGGACTTTGAACTCTCCAAGGATATTGTGTATTCCTGCACTGAATCTCAAAATCTTGAAATTGATTTTGGGGTGTTTTCTTCTGATTTCAGCAATGATTTGATATATTTTGATGAAAGTCAATTGCTTTAA 963 0.3707 MSVILPETVSAKKKKLLIKELLQGKEYATKLKLLLKNPVDSDGSPSVKELVANVLRSFSETISVMNSTEDCSLDEVAQNHVNNSDGSLVEASCNDDLKSEDTSECKKRLSPTTKDRRGSYKRRKTDETRTIVSKTIGDTHSWRKYGQKEILNSNFPRSYFRCTRKHDQGCKATKQVQLIEDNPEMYQITYIGFHTCKSTLQTPQMVSFSEDTNWDSILVNSNPHSKEVLTNYDQQDSHVISSERSIVKQEYPNNDDSTTPRSDVTDNLLDLNLWSDFKDFELSKDIVYSCTESQNLEIDFGVFSSDFSNDLIYFDESQLL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06706 320 MobiDBLite consensus disorder prediction 102 126 - -
Mepo3g06706 320 ProSiteProfiles WRKY domain profile. 131 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g06706 320 Pfam WRKY DNA -binding domain 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g06706 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 220 IPR044810 GO:0003700
Mepo3g06706 320 Gene3D WRKY domain 122 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g06706 320 SUPERFAMILY WRKY DNA-binding domain 133 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g06706 320 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06706 Mepo-Chr3 80807760 80809734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06706 12 291 WRKY Transcription Factor Family AT3G56400 37.874 1.30e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g06706 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06706 - - tpra:123913408 486.878