Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06696 ATGAAGTTGCAATTCTCTAATGTTTCTCTGGTTTTATTAATCTCCACACTGTCTCTCTTTGGCTTGATTATATCTGCTGCTGACTTGAACTCCGACCGACAAGCTCTATTGGAGTTTGCTTCTGCTGTTCCACATGCTCCAAGGCTCAACTGGAATGAATCTTCTTCAATCTGTACCTCATGGGTTGGTGTGACTTGCAACTCAAACCATACTCGTGTCGTAGGCATCCATCTTCCAGGCATTGGATTAACCGGTTCAATCCCGGAGAACACCATAGGAAAATTAGATGCTCTAAGAGTTCTTAGCCTTCATTCCAATGGTCTTGCAGGGAGTCTTCCTTCTAACATCCTTTCCATTCCTTCACTCCAATTTGTACACCTGCAGAAAAATAACTTCTCAGGTCTAATTCCTTCTTCTGTCTCTCCTAAACTAGTTGCATTGGATATTTCCTTTAACTCCTTCTCTGGAAGCATACCATCTGCATTTCAGAACCTTAGAAGACTCACTTGGTTTTATCTCCAAAACAATTCTATATCTGGACCTATCCCTGATTTCAACCTTCCAAGTCTCAAATACTTGAATTTGAGCAATAATAAATTGAATGGATCAATTCCAAATTCTATCAAAACATTCCCTTCAACTGCTTTTCTTGGAAACTCTTTCTTATGTGGTCCACCTCTTCTCAATAATTGCTCTTCAATCTCCCCTTCTCCATCTCCTTCCCCTGCATCCACACAAATCCAAAAAGCTACTGTCGCTCATAAAAAAAGCTTTAGCATAGCTGCTATACTTGCTTTAGTCATTGGAGGAATTGCATTCCTCTCTCTAATCGTTTTAGTGTTCTTTGTATGCTTTTTGAAGAAGAAAAACAATAAAAGAAGTGGCATACTGAAAGGAAAATCTTCATCTTGTGCTGGAAAAGCTGAAGTTTCAAAGAGTTTTGGGAGTGGAGTGCAAGCTGCTGAAAAGAACAAGTTGTTTTTCTTTGAAGGTTCCTCTTATACCTTTGACCTCGAAGATTTACTAAAGGCCTCAGCTGAAGTTCTTGGAAAAGGGAGCTATGGTACAGCCTACAAGGCTGTTTTGGAGGAGGGAGTGACAATGGTAGTTAAAAGGTTGAAGGAAGTTATGGTAGGAAAGAAGGAGTTTGAACAACAGTTGGATATTGTTGGGAGAATTGGACGCCATCCGAATGTTATGCCACTTCGAGCTTATTACTACTCCAAAGATGAGAAACTTTTGGTTTACAGTTACATGCCAGAAGGAAGCCTGTTTTTCTTGTTGCATGGAAACAAGGGTGCAGGAAGAACACCATTTGATTGGAATTCAAGAGTGAAGGTTGCACTTGGAGCAGCTAAAGGAATTGCTTTCATTCACACCGAAGGAGGTTCAAAATTTACACATGGAAACATCAAGTCAACCAATGTACTAATAACAGAAGAATTCGATAGCTGCATTTCTGATGTTGGATTACCACCTCTGATGAATGCACCAGCAACCATGTCAAGAACCAACGGATATAGAGCTCCAGAAGTAACTGATTCCAAGAAGATCACACAGAAGTCCGATGTATACAGCTTCGGTGTGCTGCTACTTGAAATGCTAACAGGAAAGGTTCCAATGAGATATCCTGGTTATGAGGATGTTGTTGATCTTCCAAGATGGGTTAGATCTGTTGTGAGAGAGGAATGGACCGCTGAAGTATTTGATGAAGAACTTCTTAGAGGACAATATGTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTTGCATGTGTGGCTAAGACACCAGATATGAGGCCTAGAATGGACGAAGCTGTTAGAATGATTGAGGAAATTAAACATCCTGAGTTTAAGAACAGAACATCCTCTGAATCTGAATATTCTAATGTGCCAACACCATAA 1908 0.4036 MKLQFSNVSLVLLISTLSLFGLIISAADLNSDRQALLEFASAVPHAPRLNWNESSSICTSWVGVTCNSNHTRVVGIHLPGIGLTGSIPENTIGKLDALRVLSLHSNGLAGSLPSNILSIPSLQFVHLQKNNFSGLIPSSVSPKLVALDISFNSFSGSIPSAFQNLRRLTWFYLQNNSISGPIPDFNLPSLKYLNLSNNKLNGSIPNSIKTFPSTAFLGNSFLCGPPLLNNCSSISPSPSPSPASTQIQKATVAHKKSFSIAAILALVIGGIAFLSLIVLVFFVCFLKKKNNKRSGILKGKSSSCAGKAEVSKSFGSGVQAAEKNKLFFFEGSSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGVTMVVKRLKEVMVGKKEFEQQLDIVGRIGRHPNVMPLRAYYYSKDEKLLVYSYMPEGSLFFLLHGNKGAGRTPFDWNSRVKVALGAAKGIAFIHTEGGSKFTHGNIKSTNVLITEEFDSCISDVGLPPLMNAPATMSRTNGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKVPMRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKTPDMRPRMDEAVRMIEEIKHPEFKNRTSSESEYSNVPTP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06696 635 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 419 625 - -
Mepo3g06696 635 ProSitePatterns Protein kinases ATP-binding region signature. 349 380 IPR017441 GO:0005524
Mepo3g06696 635 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Mepo3g06696 635 Pfam Protein kinase domain 347 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06696 635 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Mepo3g06696 635 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Mepo3g06696 635 SUPERFAMILY Protein kinase-like (PK-like) 347 614 IPR011009 -
Mepo3g06696 635 PANTHER OS05G0588300 PROTEIN 14 625 - -
Mepo3g06696 635 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Mepo3g06696 635 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515
Mepo3g06696 635 FunFam Leucine-rich repeat receptor-like protein kinase 142 231 - -
Mepo3g06696 635 FunFam pollen receptor-like kinase 1 311 418 - -
Mepo3g06696 635 Gene3D Ribonuclease Inhibitor 143 233 IPR032675 -
Mepo3g06696 635 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06696 635 FunFam Leucine-rich repeat receptor-like protein kinase 31 141 - -
Mepo3g06696 635 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Mepo3g06696 635 SUPERFAMILY L domain-like 39 227 - -
Mepo3g06696 635 Gene3D Transferase(Phosphotransferase) domain 1 419 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06696 Mepo-Chr3 80738525 80741904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06696 8 615 Receptor kinase-like Gene Family AT5G58300 58.987 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo3g06696 Pkinase 5.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06696 - - aprc:113868460 979.163