Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06694 ATGATTCCTCGCACGTGGCAACGGTTTCGAGCTGCTTCTTCTCAACAAGAGGGTGGTTCTTCTTCTTCTTCTTCACGGAATGTGATGTTCTCTGAAGAGGCTCGCCGTGCTGTTGCGGCGGATAGAGTTCCTTTGGTACCTTTAACTGATATTGTCGGTGGAGTTAACGACAGCTTCTCCACTTTTTCCTGGTTTGATTTTCAGCAGATTGCTAAGATGGTTGATCAAATTCTTCCTTTTTCGCTCTTGTTGTTGATTGTTTTGATCCGCCGCCACATGGAATATTTCTTTGTCACAATTGGTGTATCAGCTGTAATGTTCAGGTCAAATGAGATTGTCAAGAAACATACTGCGCTGAAGGGAGATCAGAAAGTCTCCGCTCTTCTTGCTCTCTCTTTTATGTTCATGCTGTACGTGATGTGCATTTACCAGTGTTATGGAAATGATGATGTTTTATTCCCTCTGGCCATGTTTCCGCCAAAAGCAACACCGTCTTTTGGGCAAGCGATATTCATCATTTTGGTTAATGATACAATGGTGCGGCAAGTGGCAATGGCTTTCAAGTGTTTGTTGCTGATTTACTGCAAAAATGGCAGAGGCCATAACTTCCGTCGACAGGGTCAAATCTTAACTCTGGTTGAGTACACACTGCTACTATATCGTGCTTTCTTGCCAGCACCAGTTTGGTACCGATTTTTCTTTTACATGGACTTTGGAAGTCTCTTCTCATCAATAATCACAGGATTGTATCTAACATTCAAGTTAACATCTGCAGTTGAGAAGGTGACATGCTTACTTTTTGCCTTAAAAGCATTATCAGAAGACGAAATTCTTTATGGTGTTTATGCTACACCAGAACAGGTAAGTGCTGCTGGTGATCTGTGCACTATATGCCAAGAGAAGATGCATGTTCCTATCCTGGTTCGCTGTGGACACATGTTCTGCGAGGAGTGTGTATCCGAATGGTTTGAGAGAGAATGTACTTGCCCGATGTGCAGGACATTGGTAGTACCTGCTCATCTGCGGACCTTCGGAGATGGATCAACAAGCATGTTTTATCAGTTCTGTTGA 1071 0.4314 MIPRTWQRFRAASSQQEGGSSSSSSRNVMFSEEARRAVAADRVPLVPLTDIVGGVNDSFSTFSWFDFQQIAKMVDQILPFSLLLLIVLIRRHMEYFFVTIGVSAVMFRSNEIVKKHTALKGDQKVSALLALSFMFMLYVMCIYQCYGNDDVLFPLAMFPPKATPSFGQAIFIILVNDTMVRQVAMAFKCLLLIYCKNGRGHNFRRQGQILTLVEYTLLLYRAFLPAPVWYRFFFYMDFGSLFSSIITGLYLTFKLTSAVEKVTCLLFALKALSEDEILYGVYATPEQVSAAGDLCTICQEKMHVPILVRCGHMFCEECVSEWFERECTCPMCRTLVVPAHLRTFGDGSTSMFYQFC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06694 356 ProSitePatterns Zinc finger RING-type signature. 310 319 IPR017907 -
Mepo3g06694 356 SMART ring_2 295 332 IPR001841 -
Mepo3g06694 356 Pfam Zinc finger, C3HC4 type (RING finger) 293 334 - -
Mepo3g06694 356 ProSiteProfiles Zinc finger RING-type profile. 295 333 IPR001841 -
Mepo3g06694 356 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 61 355 IPR044235 GO:0061630|GO:1904294
Mepo3g06694 356 SUPERFAMILY RING/U-box 294 339 - -
Mepo3g06694 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 340 IPR013083 -
Mepo3g06694 356 CDD RING-HC_RNFT1-like 293 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06694 Mepo-Chr3 80714494 80720984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06694 46 354 C3H Transcription Factor Family AT5G01960 62.136 7.07e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06694 - K22379 gmx:100784614 452.595