Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06685 ATGGAGACTCTGAAAGCAGCGATTCCAGAGAAACTCAAACAAGCAATTAGGGATAGCACTGTAAACACTCTTGAAGATACGTGTTCTTCTCTTCATAACTTCTTTCTTCATTTCGACCCTTTTCACCAGACTGTGTCTCAACTTGCAGACCCTAGCTATGCTTTGTGCAGCAAGGACAAAGAAGCTGCGTTGAAATATAAGCAGCTTGGTAATCAATGCTTCTCTAATGCTCATTATGCAAATGCTTTAGATTATTATACTCAGGCATTACGAAAGGCTCCTTTTGAAGTTGGTGAAATTGAAAATAATCTCATTGCAACATTGTATATCAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAGTAGAATGTTTGCGAGACTGTGATCGAGCTCTTCAGATATGTCCAAGCTATTCAAAGGCGTGGTATAGGAGAGGGAAGGCAAATGTTTCAATGGGAAACAATAGAGATGCAATCTGTGACTTAAATATAGCTAAGAGTGTCGAATCATCAACAGGAGGGAAGCGACAAATAGAATGTGAGCTGAAAATTATTTTAGACCAATCCAAGAGCACAAATATAGTAGTACAGCCGCGACAGAAGGAGAACAGCTTGAGTACTACGAGTGACATTCCTCAAATAAAGCTGCAAAGTGTCTCCGTGCCTGATAAAGGAAGAGGCATGGTGCCGCCATGTGATGTTTCACCAGGTTCGTTGGTTCATGCTGAAGAACCATATGCTACGGTAATATTAAAGCAATGTCGTGAAACTCATTGCCATTATTGCTTGAACGACCTACCTGCTGATAGAGTTCCTTGTATATCGTGTTCAATACCATTGTATTGCTCCCACCAATGCCAAATAAAGGCAGGTGGGCAAATGTTCATGATATCCACAGAAGATAATTACATTCTTAAAAACTTACCCAGCGATCTTGCTGAATATGCTGCTGAAGTGATTCAATACAATGATTGTGAGCAAAAGATTGGTGATGTTACTGAACATAAACATGAATGTCAAGGAGTACATTGGCCTGCTGTAATGCCTTCTGACATAGTTTTGGCTTGCAGAGTTCTAGCGAAGTTTTTGTCAAAGAACTCATCAGGAGATATCACAAGTTTTGTGGAAAAGTTGGAGCTTTCTCATTGTTACGAACATATGCCATTTGAAAGTAAATTGGATTCACATATATACGCCATTGTATTGTTATATTGTCTTAAACATTCTTATGGAGCTATGCTTGCCATCAATGGAATCTCTATATCACAGGTGGTCATAGTTATTTCTCAGATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCAAGGACTGTCAGATCAGTCTGGAGGATTTCCATTTCATTCCAGTGTACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGCAAAGCTATTTATAAAGTTGGCAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCGCGCACACTCTATTTACGAACAACACAGGCTGTAGCAGCTGGGTGTCAGCTGGAATTGTCTTACGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCAAAGTTTTCTAAAAGATGAATACGCATTTCATTGTCAATGTACTGGTTGTTCAGAAGTCAATCTATCTGACATCGTCCTCAATGCTTTTCATTGTGTAAACCCAAATTGTTCTGGCGCAGTGTTGGAAAGCAGAGTACTTGAATGTGAAAATCAGAAAATCAAACGCTTAGCTATTGCTGATAAAGTTATCAAGAACGATGACATCTATGAAGTTTGTCTTCATGCATTTAACCAAAATGACGCCTCTATTCATATTCAACCTGGATTCTGTTTGAAATGCAGTTCTTACCGTGATCTGGAGTCTTCACGTGCAACAGTTGATAAAGCCTTAATATGCATAAAAAGGCTGCAGGATGCAATACTGTCAAAAGAAATTTCAAATACTTCCATTTCGGACGCTTTGAGATCTCTTCATTTGCTGAGATCAAATTTGCATGCATACAATAAGGTTATTGCAGAGACAGAAGACAACCTTGCCCAAGCTTTTTGTTTAGTGGGAGAATTACAATTATCGGCGGATCATTGTAAAGCATCTATTCAGATTTTGGAGAAGATATATGATCCTGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCTTCCGTCCAACTTTCCTTGGGTGACAATAGTGCTGTCAACAGCATTGGTCGAATAGGTGCTATTTTCTCACGTTATTATGGACATCATGCAGACTTGGTCTTTCCTTATCTTCAGTACCTTAGGAGAGAAATTTAG 2337 0.3868 METLKAAIPEKLKQAIRDSTVNTLEDTCSSLHNFFLHFDPFHQTVSQLADPSYALCSKDKEAALKYKQLGNQCFSNAHYANALDYYTQALRKAPFEVGEIENNLIATLYINRATVLHKMNLLVECLRDCDRALQICPSYSKAWYRRGKANVSMGNNRDAICDLNIAKSVESSTGGKRQIECELKIILDQSKSTNIVVQPRQKENSLSTTSDIPQIKLQSVSVPDKGRGMVPPCDVSPGSLVHAEEPYATVILKQCRETHCHYCLNDLPADRVPCISCSIPLYCSHQCQIKAGGQMFMISTEDNYILKNLPSDLAEYAAEVIQYNDCEQKIGDVTEHKHECQGVHWPAVMPSDIVLACRVLAKFLSKNSSGDITSFVEKLELSHCYEHMPFESKLDSHIYAIVLLYCLKHSYGAMLAINGISISQVVIVISQIKVNCMTVVRLKSIDAQGLSDQSGGFPFHSSVHLTSNVEQVRVGKAIYKVGSLFNHSCQPNVHAYFLSRTLYLRTTQAVAAGCQLELSYGPQVGLWDCKDRQSFLKDEYAFHCQCTGCSEVNLSDIVLNAFHCVNPNCSGAVLESRVLECENQKIKRLAIADKVIKNDDIYEVCLHAFNQNDASIHIQPGFCLKCSSYRDLESSRATVDKALICIKRLQDAILSKEISNTSISDALRSLHLLRSNLHAYNKVIAETEDNLAQAFCLVGELQLSADHCKASIQILEKIYDPDDIVIAYELVKLSSVQLSLGDNSAVNSIGRIGAIFSRYYGHHADLVFPYLQYLRREI 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06685 778 Gene3D - 259 291 - -
Mepo3g06685 778 Gene3D Tetratricopeptide repeat domain 38 195 IPR011990 GO:0005515
Mepo3g06685 778 Pfam SET domain 452 521 IPR001214 GO:0005515
Mepo3g06685 778 SUPERFAMILY TPR-like 58 166 IPR011990 GO:0005515
Mepo3g06685 778 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 777 - -
Mepo3g06685 778 Gene3D SET domain 414 520 IPR046341 -
Mepo3g06685 778 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Mepo3g06685 778 SUPERFAMILY SET domain 220 546 IPR046341 -
Mepo3g06685 778 Gene3D SET domain 230 258 IPR046341 -
Mepo3g06685 778 ProSiteProfiles SET domain profile. 215 521 IPR001214 GO:0005515
Mepo3g06685 778 Gene3D Tetratricopeptide repeat domain 528 777 IPR011990 GO:0005515
Mepo3g06685 778 SMART tpr_5 685 718 IPR019734 GO:0005515
Mepo3g06685 778 SMART tpr_5 63 96 IPR019734 GO:0005515
Mepo3g06685 778 SMART tpr_5 106 139 IPR019734 GO:0005515
Mepo3g06685 778 SMART tpr_5 140 173 IPR019734 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g06685 SET 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06685 K24634 - gmx:100783548 1197.57