Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06684 ATGGCACCACCAGGTAGACCCAAAAAAGTTGTGCAAATGGCAGATATTACTGAAGAAGAAAATGGGCATGATGATGATGAGATAAAGAAGAACGTGGTGAGAGCTTTGCCATTTTTTAAACTATTGAGCTATGCTGACTATGTGGATTGGATTCTTATGGGTTTGGGAACTTTAGGTTCGATTGTGCATGGCATGGCACTTCCTGTTGGTTATTTGTTGTTAGGAAAAGCTCTTAATGCTTTTGGAAACAATATTAATGACATTGATGCTATGGTTCCCGCTCTTAAAAAGGTTGTTCCATTTGTGTGGTACATGGCCATAGCCACATTTCCTGCTGGGGTACTTGAGATTGGTTGTTGGATGTATGCAAGTGAAAGACAGTTATCACGCCTAAGATTAACTTATCTGAAAGCAGTCCTCAGTCAAGAGATAGGAGCTTTTGATACAGAATTAACAAGTGGTAAAGTCATCACTGGAATAAGCAAGCACATGAGTGTCATACAAGATGCCATTGGTGAGAAGTTAGGTCACTTCACCTCTAGCTGCGCAACTTTCTTTGCCGGAATGGTGATCGCCACGATAGCCTGTTGGGAAGTGGCACTACTATGCTTAGTGGTTGTCCCTCTTATTCTTATAATTGGAGCAACTTACACTAAGAAAATGAACAGAATCTCAACTACCAAATTGTTTTATCATTCTGAAGCCACATCTATGATAGAGCAGACAATATCACAAATAAAAACAGTATATGCTTTTGTTGGAGAGGGATTGGCGGTAAAATCCTTCACAGAGAACATGGATAAACAGTATGTTGTAAGCAAGGGGGAAGCACTTGTGAAGGGAGTTGGAACAGGAATGTTTCAAACTGTGAGTTTTTGTTCTTGGTCTCTGATTATATGGGTTGGAGCTGTTGTTGTCAGAGCTGGGAGAGCACAGGGAGGAGATATAATAACTGCGGTTATGAGCATTCTTTTTGGTGCCATATCTATCACTTATGCAGCACCAGACATGCAAATATTCAATCAGGCAAAAGCTGCAGGATATGAGGTCTTCCAAGTGATCCAAAGAAAGCCACTTGTACATAATGAATCGAAAGGGAAGATGCCTAAGAAGATTGATGGTTGCATTGAGCTTCGAAATGTTTACTTTTCATACCCATCACGGCCGGAGAAACCTATCCTTCAAGGACTGTCATTGTCCATTCCAGCAGGAAAGACAGTAGCTCTAGTTGGTAGCAGTGGTTGTGGAAAGAGCACTGTTATTTCCCTGATAACTAGGTTTTATGACCCGACTAGAGGAGAAATTTTTATCGACAGTCACAGTATCAAGGATCTTGATCTGAAGTTCCTTCGAAGTAATATTGGGGCTGTTTACCAAGAACCATCACTCTTCACAGGCACGATCAAGGACAATTTGAAACTGGGGAAAATGGACGCCAATGATGAAGAGATTCAAAAGGCAGCAGTGATGTCCAATGCACACTCTTTCATATCACAGCTTCCTAGTCAGTACCTAACTGAGGTAGGACAAAGGGGCGTCCAAGTATCAGGAGGTCAGAAACAGAGAATTGCGATCGCAAGAGCCATATTGAAAAATCCTCCCATCCTTTTGCTTGATGAGGCCACTAGTGCCCTTGATTCAGAGTCAGAAAAGCTGGTTCAAGAAGCACTTGATACAGCTATGCAGGGAAGGACTGTCATCTTGATTGCACACAGGCTCTCAACAGTAGTAAATGCAGATATGATTGCCGTAGTGGAGAATGGAGAAATTGTAGAGACAGGAACACACCAGAGTTTGTTAGACACAAGCAAATTCTATAGTACATTATTCAGCATGCAGAACCTTGAACCAGCTCCTGAGCAAAGAACTACAACTTCCAAAAATAAAAGTGTCCGCCGAGAAGACACTATTGATGAAACTAGACCATTACCAGAGACACAGGGAGAGGTCCAAAGAGATCTCACAGAGCACTCTGTACTAAAGGAACAGAACAAGATCGTCACAACAGAAGAAAAAATATTTTTCAGAATTTGGTTTGATTTAAAAAAGACGGAGCTTGTGAAGATTGTCATTGGATCATTTGCAGCAGCTTTCTCTGGCATCTCAAAGCCGTTTTTCGGATTCTACATCATCACCATCGGAGTAGCATACTTCCAAGAAGATGCAAAACGAAAAGTTGGACTATTCTCAGCCATCTTCTCAGCAATAGGATTGCTTTCATTATTTAGCCACACCTTCCAGCATTACTTCTTTGGAGTGGTTGGAGAAAAGGCCATGGCAAATTTCAGACGCGCTCTCTATTCAGGTGTGCTTTGTAACGAAGTAGGCTGGTTTGACAAACCTGAGAACACTGTTGGTTCATTAACATCGCGCATTATCAGTGATACTGCCATGGTCAAAATCATAATTGCTGATCGCATGTCTGTGATTGTGCAATGTGTTTCCTCCATACTTATAGCAACAGGTGTTAGCATGTATGTCAATTGGAGAATGGCTTTGGTCGCATGGGCTGTGATGCCATGCCACTTCATAGGTGGCCTCATTCAAGCCAAGTCTGCCAAAGGATTTTCAGGTGACTACTCTGGTACACATTCAGACCTTGTTGCTCTTGCGTCCGAGTCCACAACCAACATAAGGACTATTGCATCATTTTGTCATGAAGAGCAAGTGCTAGAGAAAGCCAAAACATATCTGGACATTCCAAAGAAAAAGTACAGGAAAGAAAGTATCAAATATGGCATCATTCAAGGCTTCTCCCTTTGCTTATGGAACATTGCACACGCTGTTGCTTTGTGGTACACTACAATTCTAGTTGACAGACGTCAAGCCTCCTTTGAAAATGGAATAAGAGCGTACCAAATTTTTTCTCTCACAGTTCCTTCTATCACAGAATTATACACATTGATTCCGACAGTCATCACTGCCATCAATATGCTAACCCCGGCATTCAAAACCCTTGACCGTAAAACTGAAATTGAGCCTGATATACCGGACGATTCCCAGCCTGAGAGGATCCAAGGAAACGTTGAATTTGAAAATGTAAATTTCAAATACCCTTTAAGACCTGCAGTAACTGTTCTAGACAATTTCAGTTTACAAATTGAAGCTGGATCTAAAGTGGCTTTTGTAGGACCAAGTGGCGCTGGAAAATCATCTGTTTTGGCCCTTTTACTAAGATTTTATGATCCGATGGTGGGAAAAGTATTAATTGATGGGAAAGACTTGAGGGAATACAATCTAAGATGGTTAAGGACACAAATAGGGCTGGTACAACAAGAGCCACTGCTTTTTAACTGCTCAATTAGAGAAAATATTTGCTATGGAAGTAATGGAGCTTTTGAAAGTGAAATTGTAGAGGTTGCGAGAGAAGCAAATATACATGAATTTGTCAGTAATCTACCAAATGGATATAACACTGTTGTTGGCGAGAAAGGCTGCCAGATTTCGGGAGGACAAAAGCAAAGAATAGCCATTGCCAGAACCTTACTAAAGAAGCCAGCAATATTACTCCTTGATGAAGCAACGAGTGCTCTCGATGCTGAGTCTGAAAGAACTATAGTAAATGCTATTAAAGCAATGAATCTAAAGGAAGAAACTGGTTTGCGTTCAAGAATCACCCAGATAACAGTAGCTCATAGACTTTCCACAGTCAGAAATTCAGATACCATAATAGTCATGGAAAAAGGTAAAATTGTAGAGACAGGCTCCCATTCAACCCTAATAGAAATGGATGCAGGACTCTATTCAAGATTATTCAGACTACAGAGCTTTGATGAAACCTCATAA 3786 0.4105 MAPPGRPKKVVQMADITEEENGHDDDEIKKNVVRALPFFKLLSYADYVDWILMGLGTLGSIVHGMALPVGYLLLGKALNAFGNNINDIDAMVPALKKVVPFVWYMAIATFPAGVLEIGCWMYASERQLSRLRLTYLKAVLSQEIGAFDTELTSGKVITGISKHMSVIQDAIGEKLGHFTSSCATFFAGMVIATIACWEVALLCLVVVPLILIIGATYTKKMNRISTTKLFYHSEATSMIEQTISQIKTVYAFVGEGLAVKSFTENMDKQYVVSKGEALVKGVGTGMFQTVSFCSWSLIIWVGAVVVRAGRAQGGDIITAVMSILFGAISITYAAPDMQIFNQAKAAGYEVFQVIQRKPLVHNESKGKMPKKIDGCIELRNVYFSYPSRPEKPILQGLSLSIPAGKTVALVGSSGCGKSTVISLITRFYDPTRGEIFIDSHSIKDLDLKFLRSNIGAVYQEPSLFTGTIKDNLKLGKMDANDEEIQKAAVMSNAHSFISQLPSQYLTEVGQRGVQVSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALDTAMQGRTVILIAHRLSTVVNADMIAVVENGEIVETGTHQSLLDTSKFYSTLFSMQNLEPAPEQRTTTSKNKSVRREDTIDETRPLPETQGEVQRDLTEHSVLKEQNKIVTTEEKIFFRIWFDLKKTELVKIVIGSFAAAFSGISKPFFGFYIITIGVAYFQEDAKRKVGLFSAIFSAIGLLSLFSHTFQHYFFGVVGEKAMANFRRALYSGVLCNEVGWFDKPENTVGSLTSRIISDTAMVKIIIADRMSVIVQCVSSILIATGVSMYVNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSGTHSDLVALASESTTNIRTIASFCHEEQVLEKAKTYLDIPKKKYRKESIKYGIIQGFSLCLWNIAHAVALWYTTILVDRRQASFENGIRAYQIFSLTVPSITELYTLIPTVITAINMLTPAFKTLDRKTEIEPDIPDDSQPERIQGNVEFENVNFKYPLRPAVTVLDNFSLQIEAGSKVAFVGPSGAGKSSVLALLLRFYDPMVGKVLIDGKDLREYNLRWLRTQIGLVQQEPLLFNCSIRENICYGSNGAFESEIVEVAREANIHEFVSNLPNGYNTVVGEKGCQISGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTIVNAIKAMNLKEETGLRSRITQITVAHRLSTVRNSDTIIVMEKGKIVETGSHSTLIEMDAGLYSRLFRLQSFDETS 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06684 1261 MobiDBLite consensus disorder prediction 626 641 - -
Mepo3g06684 1261 Gene3D ABC transporter type 1, transmembrane domain 40 971 IPR036640 GO:0005524|GO:0016020
Mepo3g06684 1261 Gene3D - 366 614 IPR027417 -
Mepo3g06684 1261 CDD ABC_MTABC3_MDL1_MDL2 1009 1255 - -
Mepo3g06684 1261 FunFam ABC transporter B family member 1 999 1256 - -
Mepo3g06684 1261 Pfam ABC transporter transmembrane region 690 948 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06684 1261 Pfam ABC transporter transmembrane region 54 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06684 1261 PANTHER ABC TRANSPORTER B FAMILY 18 742 IPR039421 -
Mepo3g06684 1261 FunFam ABC transporter B family member 4 366 621 - -
Mepo3g06684 1261 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524|GO:0016887
Mepo3g06684 1261 CDD ABC_6TM_Pgp_ABCB1_D2_like 683 992 - -
Mepo3g06684 1261 Gene3D - 999 1260 IPR027417 -
Mepo3g06684 1261 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 690 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06684 1261 MobiDBLite consensus disorder prediction 616 641 - -
Mepo3g06684 1261 SUPERFAMILY ABC transporter transmembrane region 676 995 IPR036640 GO:0005524|GO:0016020
Mepo3g06684 1261 SMART AAA_5 1036 1230 IPR003593 GO:0016887
Mepo3g06684 1261 SMART AAA_5 403 589 IPR003593 GO:0016887
Mepo3g06684 1261 SUPERFAMILY ABC transporter transmembrane region 40 358 IPR036640 GO:0005524|GO:0016020
Mepo3g06684 1261 ProSitePatterns ABC transporters family signature. 1148 1162 IPR017871 GO:0005524|GO:0016887
Mepo3g06684 1261 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 55 342 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06684 1261 CDD ABC_MTABC3_MDL1_MDL2 376 613 - -
Mepo3g06684 1261 Pfam ABC transporter 394 543 IPR003439 GO:0005524
Mepo3g06684 1261 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Mepo3g06684 1261 Pfam ABC transporter 1027 1176 IPR003439 GO:0005524
Mepo3g06684 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 613 IPR027417 -
Mepo3g06684 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1002 1255 IPR027417 -
Mepo3g06684 1261 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1009 1253 IPR003439 GO:0005524
Mepo3g06684 1261 CDD ABC_6TM_Pgp_ABCB1_D1_like 53 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06684 Mepo-Chr3 80609173 80616460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06684 2 1260 Calmodulin-binding Proteins AT2G36910 40.465 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06684 K05658 - zju:107414909 1780.76