Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06662 ATGGGTTCTCTTGATTGTGTTCCATCGGTCGATGATGGGATGGCGGTGTTGTCTCTGAATTCGCTTCCGTTAGGGTTTCGATTCCGACCTACCGACGAGGAACTTATCGATTACTACTTACGTTCGAAGATCAATGGAAATGGTGATGAGGTTTGGGTTATCAGAGAGATTGATGTCTGTAAATGGGAACCCTGGGACATGCCTGATTTGTCTGTGGTACGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGATCGAAAGTATCCGAACGGACATCGATTGAACAGAGCAACAAATCATGGATACTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGAATGAAGAAGACTTTAGTTTTCTACAGTGGTCGTGCACCCAAAGGGAAGAGGACTAATTGGGTTATGCATGAGTATCGTCCCACCCTCAAGGAGCTTGATGGTACCAACCCAGGACAGAATCCATATGTCCTCTGTCGATTATTTAAGAAAAATGATGAGAGCGTTGAAGTTTCAAACTGTGGTGAAGTGGAGCAAACTACTTCAGCTCCTTTGGCTGCCAATTACTCTCCAGAAGAAATACAATCTGATCCGGCTCCTATTACAGTATCCACATCACAGGTCACGGAAGAGGATAAGCAGCTGGCTTTAATCCCTGATATCTCTGAGGAAACCATATCTAATGTTGTAACCTCAGTTGATTACCATAGCGATGGATATGATGCTCATTATGTCCAAAATCAAATTGCAAAACTAGCTGCAGAGGATGATCAGGCGTTGAACTTTGACATGTATTATAACCCGAAAGACGGTCTATTGTTAGATGACAGATTATTCTCCCCACCTCTGGTGCATATGCCACAAGAATTTCACTATCAAGCAAACAATGAATCAGACGGTCGATGTGGGCTTCAGTATGGTTCAAATGAGATAAATATTTCAGACTTTTTGAATTATGATCTTAACTGGGATCAAATTCCCTGTGAGGTGTCCGTCAGTCACCAGCCGAACTTCCCCATGTTAAATGTTAAGGACAGTGGTTCAGGAAGCAACTCAGACGTGGAAGTAGCCAATATGACTGGTATGCAAGCTGCTTATCCTCACGAGGCAATTGACAGAAGGATTCCTTTTGCGACAACACCGTCGTTTAGCCACACCTTTGATTACAGTGGTGATGACCAAAAGAGCAATGTTGTTTTATTACAAAACAATTTCCAGACGGCTTTCCCATCGGATGTTAATAATACTGGTGAAGTGTACAATGCTGTCAATGGATATGAGCAACCAAGGACCTATAATACAATTATGAGCGGTGAAAGTGGAATCGTAAGGAGGGCCCGGCCAGCACGAGATGAACAATTTAAGACAAATCCGATGCAAGGTACTGCTCAAAGGAGAATTCGGTTGTCAAAGATTGAACATGTCTCATGTGGGAAGGTTAAGGTTAAAGATGAGAGTTGTACACAAGAACAACATAATTCAAAACTGATTATTGCTGTGGTAAGAAAAGTTTGCTTATTTTGCTTGCTTGACCTAGAGGTTTTCTCTGCATGTGTTGTGAGGTTTGTTTCTATTTTGCAGGAGAAGAAAGCTGCGGAAAATCATGCTTCGGATGATGAAAGTGCTATTTCTACTAATCATGGATGTAAACAGAGGAAGGTTCACAAGTCAATTGTACATGCAAGCAAGGGGTTAAGAAATTTTTTATTGCTAGGAAGAGCACCTTTCAGATCAAAGACTTCCTCCAACTGTGCTCTGTGGTCTTCTGTTTTTGTAGTTTCTGCATCTGTGCTGGTTTCTTTAGCAGCCTTTACTAACATATGGGGATATCTTAAATTTTGA 1866 0.4196 MGSLDCVPSVDDGMAVLSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVWVIREIDVCKWEPWDMPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTILIGMKKTLVFYSGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDESVEVSNCGEVEQTTSAPLAANYSPEEIQSDPAPITVSTSQVTEEDKQLALIPDISEETISNVVTSVDYHSDGYDAHYVQNQIAKLAAEDDQALNFDMYYNPKDGLLLDDRLFSPPLVHMPQEFHYQANNESDGRCGLQYGSNEINISDFLNYDLNWDQIPCEVSVSHQPNFPMLNVKDSGSGSNSDVEVANMTGMQAAYPHEAIDRRIPFATTPSFSHTFDYSGDDQKSNVVLLQNNFQTAFPSDVNNTGEVYNAVNGYEQPRTYNTIMSGESGIVRRARPARDEQFKTNPMQGTAQRRIRLSKIEHVSCGKVKVKDESCTQEQHNSKLIIAVVRKVCLFCLLDLEVFSACVVRFVSILQEKKAAENHASDDESAISTNHGCKQRKVHKSIVHASKGLRNFLLLGRAPFRSKTSSNCALWSSVFVVSASVLVSLAAFTNIWGYLKF 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06662 621 Gene3D NAC domain 31 177 IPR036093 GO:0003677|GO:0006355
Mepo3g06662 621 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Mepo3g06662 621 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 225 - -
Mepo3g06662 621 FunFam Nac domain-containing protein 86 31 175 - -
Mepo3g06662 621 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Mepo3g06662 621 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06662 Mepo-Chr3 80471699 80475577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06662 14 477 NAC Transcription Factor Family AT4G35580 41.667 1.85e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g06662 NAM 3.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06662 - - gmx:100777071 711.449