Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06661 ATGGTCTTGACTTTTGTGTTTTGTCCATTGCTTGACGGCAAGATGGTGACGTCGTCTCTGAATTCGCTTCCGCTAGGGTTCCGATTCCGACCTACGGACGGGGAACTTATCGATTACTACCTTCGTTCAAAGATTAACGGCAATGGTGACGAGGTTCAGGTTATCCGAGAAATCGATGTCTGCAAATGGGAACCCTGGGATATGCCCGATTTGTCAGTGATAAAAGACAATGACCCAGAGTGGTTCTTCTTCTGTCCACAGGATCGACAATATCCAAATGGGAATCGATTGAACAGAGAAACAAATCATGGATATTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCCGGAACCATCTTGATTGGGATGAAGAAGACATTAGTTTTCTACATTGGTCGTGCACCTAACGGGAGGAGGTCTAATTGGGTAATGCACGAGTATCGTCCCTCCCTTGAGGAGCTTGATGGAACGAACCCAGGACAGAAAGCATATGTGCTATGTCGGTTATTTAAGAAAAACGAAGAGAGCCTTGAAGTTTCTAACTGTGGTGAGGGGGAGCAAACTAATTCAGCTCCAGAAGAACTACAATCTGATCCAGCCCCCGTTACAGTATCCACATCACAGGTCAGAAAAGAGGATAAGCAGCTGGCCGTTATCCCTAGTATCTCAGAGGAAAAGTGA 684 0.4561 MVLTFVFCPLLDGKMVTSSLNSLPLGFRFRPTDGELIDYYLRSKINGNGDEVQVIREIDVCKWEPWDMPDLSVIKDNDPEWFFFCPQDRQYPNGNRLNRETNHGYWKATGKDRKIKSGTILIGMKKTLVFYIGRAPNGRRSNWVMHEYRPSLEELDGTNPGQKAYVLCRLFKKNEESLEVSNCGEGEQTNSAPEELQSDPAPVTVSTSQVRKEDKQLAVIPSISEEK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06661 227 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Mepo3g06661 227 SUPERFAMILY NAC domain 15 173 IPR036093 GO:0003677|GO:0006355
Mepo3g06661 227 Gene3D NAC domain 32 178 IPR036093 GO:0003677|GO:0006355
Mepo3g06661 227 FunFam Nac domain-containing protein 86 32 176 - -
Mepo3g06661 227 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 190 - -
Mepo3g06661 227 MobiDBLite consensus disorder prediction 181 227 - -
Mepo3g06661 227 MobiDBLite consensus disorder prediction 181 213 - -
Mepo3g06661 227 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06661 Mepo-Chr3 80467453 80468820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06661 15 207 NAC Transcription Factor Family AT4G35580 62.755 1.35e-85 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g06661 NAM 1.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06661 - - mtr:11418502 424.476