Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06642 ATGGGTGAGGTTGTAATGAGTGGTGAGAAAATAGTGAGAGTTGAAGAAGAAGAAGAGAAGGTGAGGGAAGAGGAAGGGAGTGGAGGAACTGAGAATAGAGGCGGTGGTGGTGGTGAAATGAAAGGGCTTATGAGGTGGGAGAAATTCTTGCCAAAAATGGTTTTGAGGGTGCTTTTGGTTGAAGCTGATGATTGTACAAGACAGATTATAACAGCACTTCTCAGAAAATGTAACTATAAAGTTGCTGCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTCAAGGGAAGACCACGCAGTATTGATCTAATACTTACAGAAGTCGATTTGCCAGCCATATCCGGCTATGCACTTCTCACATTAATTATGGAGCATGATATTTGCAAAAGCATCCCTGTCATAATGATGTCGTCACAAGATTCAGTTAGCACAGTATACAAATGCATGTTGAGAGGTGCAGCTGACTATCTTGTTAAGCCGATTCGAATAAATGAACTAAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCACAGTCAGCCGCAACCGCTGGCATAAATGGCCCTCAAGATGAAAGTGATACACAACAGAAGTTTGAAGCCACTGCTGAAAACAACGCTGCCAGTAATCGTTCTGGTGGTGATGCTGCTTGCATTCAAAGAAACAAGGATTTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTGCTGAAGCATATCCAAGTGAAATAAAGACACAAGAGCTTGACATTCATTTAGGCCAGGCAGTGATCGCGCAGGATAGCCACGCCGGAGGATTAAGCGTGGCTAACTGCAAAAATGGAGTGGCAAGCACAAATAACTGTAAAAATGGAGAGACAAGCGCAAATAATTGCAATGACGGCGATGATCAAGAGCATTTTAGGAATGCTAGCATCAGTGGTGAGGTTCATGACAATCACTATGTTCAAATTTACTCTACTACTAAGGAAGCTATTGACTTGATTGGAGCATTTCGTACTGATCCGAATTGCAGTCTCAAAAATTCATCAATTGATTGCACAGGCAAGTTTGACCATTCTCCACAGTTGGATCTTTCCCTCAGAAGCTCTCATCCCAGCAACTTTGAGAAAGATCTCACCGAAGAAAGGCACACCCTTATGCATTCCAATGCTTCAGCTTTCAAGCGGTATACCAATAGACAATTGCAAGCATCACCTGCAGTAGTGATTAACTTCTCTCATCAACAAAGAGAACAAAAAACAAATAATGAGAACCATAACTCAGATAGTTCAATACCAAGTATGCAAAAAGAATCTGAACTTGCAACTTCACATTCCCAGCAAGGGCATTCTCTCCCAATTCCTGTAAAAGGCGTAAGGTTCAATGATCTTTGTATGGCCTATGGTTCAACCCTTCCACCAGGGTTTCGTACACAATCAGGTCCACCATCAATGCCTGGTTCAGTTGTGTTTCTCGAACAAAACTTTCAAGCAGATGCATTTTATCAGTCAAATGTTAAAGAAAATAATTCAGAGCAGCTTTACGAACCCTGCGGTCCAAATGGAAACAGCACTCCAAACCAAATTGTGTATACACAGGAACACAAGTCAGAACATCCGGAGGATCAAAGACTTATCTCCCCTACAACTGATCAAAGTGTATCCAGTAGTTTTTGTAATAATGGAAATGCCAGCAATTTTAACAGTATTGGTTACGGAAGTAATTGTGGAAGTAGCGGCAATGCTGAACAAGTTGCCGCTTTCAGAACAACAGCAGTTTCAGAGGGAAAGAATGAAGACCTCACAAACAGTGGATATTCACATCGAGCTATGCTACGAGAAGCAGCTCTAAACAAGTTCCGTTTAAAACGAAAAGAGAGATGTTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCTCGAGTTAAAGGACAATTTGTTCGCCAACCGAATCCTGATTCTCTTTCTGGAGAAAAAGATTGCTAA 1986 0.4179 MGEVVMSGEKIVRVEEEEEKVREEEGSGGTENRGGGGGEMKGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQRNKDLIEKGSDAQSSCAEAYPSEIKTQELDIHLGQAVIAQDSHAGGLSVANCKNGVASTNNCKNGETSANNCNDGDDQEHFRNASISGEVHDNHYVQIYSTTKEAIDLIGAFRTDPNCSLKNSSIDCTGKFDHSPQLDLSLRSSHPSNFEKDLTEERHTLMHSNASAFKRYTNRQLQASPAVVINFSHQQREQKTNNENHNSDSSIPSMQKESELATSHSQQGHSLPIPVKGVRFNDLCMAYGSTLPPGFRTQSGPPSMPGSVVFLEQNFQADAFYQSNVKENNSEQLYEPCGPNGNSTPNQIVYTQEHKSEHPEDQRLISPTTDQSVSSSFCNNGNASNFNSIGYGSNCGSSGNAEQVAAFRTTAVSEGKNEDLTNSGYSHRAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQPNPDSLSGEKDC 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06642 661 MobiDBLite consensus disorder prediction 419 445 - -
Mepo3g06642 661 CDD psREC_PRR 57 160 - -
Mepo3g06642 661 ProSiteProfiles Response regulatory domain profile. 56 174 IPR001789 GO:0000160
Mepo3g06642 661 SUPERFAMILY CheY-like 55 181 IPR011006 -
Mepo3g06642 661 ProSiteProfiles CCT domain profile. 607 649 IPR010402 GO:0005515
Mepo3g06642 661 Pfam CCT motif 607 649 IPR010402 GO:0005515
Mepo3g06642 661 Gene3D - 53 269 - -
Mepo3g06642 661 Pfam Response regulator receiver domain 57 168 IPR001789 GO:0000160
Mepo3g06642 661 MobiDBLite consensus disorder prediction 410 449 - -
Mepo3g06642 661 MobiDBLite consensus disorder prediction 15 29 - -
Mepo3g06642 661 MobiDBLite consensus disorder prediction 633 661 - -
Mepo3g06642 661 MobiDBLite consensus disorder prediction 181 215 - -
Mepo3g06642 661 PANTHER TWO-COMPONENT RESPONSE REGULATOR 55 254 IPR045279 GO:0009736
Mepo3g06642 661 SMART REC_2 55 170 IPR001789 GO:0000160
Mepo3g06642 661 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06642 Mepo-Chr3 80313180 80317043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06642 589 649 Response Regulator Gene Family AT5G24470 70.149 4.85e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mepo3g06642 Response_reg 5.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06642 K12130 - gmx:100777119 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06642 3 80313180 80317043 Mepo3g06642 3 80313180 80317043 ECH